Volume 9, Number 6—June 2003
Dispatch
Tick-Borne Encephalitis with Hemorrhagic Syndrome, Novosibirsk Region, Russia, 1999
Table 1
Homology between the nucleotide acid sequences of prototype strains for three subtypes of tick-borne encephalitis virus, Omsk hemorrhagic fever virus, and hemorrhagic tick-borne encephalitis virusa
Viruses | European subtype (subtype 1) (%) | Far Eastern subtype (subtype 2) (%) | Siberian subtype (subtype 3) (%) | Omsk hemorrhagic fever virus | |||||
---|---|---|---|---|---|---|---|---|---|
Neud | KemI | Sofiin | Oshima1 | Crimea | Botsad | Eltsovka | Lesopark | Omskhf | |
Neud | 100.00 | 98.06 | 81.94 | 82.78 | 82.50 | 84.72 | 83.89 | 84.72 | 80.28 |
KemI | 98.06 | 100.00 | 81.39 | 82.50 | 81.94 | 83.89 | 83.06 | 83.89 | 80.00 |
Sofiin | 81.94 | 81.39 | 100.00 | 95.83 | 94.44 | 85.28 | 84.72 | 85.28 | 77.78 |
Oshima1 | 82.78 | 82.50 | 95.83 | 100.00 | 97.50 | 85.83 | 85.28 | 85.83 | 77.22 |
Crimea | 82.50 | 83.06 | 94.44 | 97.50 | 100.00 | 86.67 | 85.56 | 86.67 | 78.33 |
Koltsovo 1 | 81.67 | 81.11 | 99.72 | 96.11 | 94.72 | 85.00 | 84.44 | 85.00 | 78.06 |
Koltsovo 19 | 80.28 | 79.44 | 92.50 | 93.61 | 93.06 | 83.33 | 82.22 | 83.33 | 76.67 |
Koltsovo 23 | 78.61 | 78.06 | 91.39 | 92.22 | 91.94 | 82.50 | 81.39 | 82.50 | 75.00 |
Koltsovo 29 | 80.83 | 80.00 | 92.78 | 93.89 | 93.33 | 83.61 | 82.50 | 83.61 | 77.50 |
Botsad | 84.72 | 83.89 | 85.28 | 85.83 | 86.67 | 100.00 | 97.78 | 98.89 | 78.89 |
Eltsovka | 83.89 | 81.94 | 84.72 | 85.28 | 85.56 | 97.78 | 100.00 | 97.78 | 78.06 |
Lesopark | 84.72 | 83.89 | 85.28 | 85.83 | 86.67 | 98.89 | 97.78 | 100.00 | 78.06 |
Omskhf | 80.28 | 80.00 | 77.78 | 77.22 | 78.33 | 78.89 | 78.06 | 78.06 | 100.00 |
aViruses shown in boldface are the hemorrhagic variants of tick-borne encephalitis virus.
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