Volume 11, Number 9—September 2005
Research
Fluoroquinolone-resistant Escherichia coli, Indonesia
Table 2
Virulence factor | All isolates (n = 394) | Phylogenetic group, n (%) |
|||
---|---|---|---|---|---|
A (n = 215) | B1 (n = 101) | B2 (n = 17) | D (n = 61) | ||
papA | 28 (7) | 7 (3) | 11 (11) | 8 (47)* | 2 (3) |
papC | 29 (7) | 8 (4) | 11 (11) | 8 (47)* | 2 (3) |
iutA | 131 (33) | 66 (31) | 32 (32) | 8 (47) | 25 (41) |
kpsM II | 56 (14) | 19 (9) | 23 (23) | 11 (65)* | 3 (5) |
hlyD | 20 (5) | 8 (4) | 7 (7) | 5 (29)* | 0 |
sfa/focDE | 8 (2) | 2 (1) | 4 (4) | 2 (12)* | 0 |
afa/draBC | 11 (3) | 6 (3) | 2 (2) | 1 (6) | 2 (3) |
*p<0.05.
1The first 3 authors contributed equally to this manuscript.
2Widjoseno Gardjito, Erni P. Kolopaking, Djoko Roeshadi, Eddy Rahardjo, Hari Parathon, Kuntaman Kuntaman, Ni Made Mertaniasih, Nun Zairina, Endang Isbandiati, Mariyatul Qibtiyah, Marijam Purwanta, Usman Hadi, Ariawan Soejoenoes, Budi Riyanto, Hendro Wahyono, Musrichan Adhisaputro, Bambang Triwara, Endang Sri Lestari, Bambang Wibowo, Muchlis AU Sofro, Helmia Farida, Peterhans van den Broek, Offra Duerink, Henri Verbrugh, Inge Gyssens, and Monique Keuters.
3ExPEC: papEF (P fimbrial tip pilins); papG (P adhesin); papG alleles I, II, and III; sfaS (S fimbriae); focG (F1C fimbriae); iha (putative adhesin-siderophore); bmaE (M fimbriae); gafD (G fimbriae); F17a (F17a fimbriae); clpG (CS31A adhesin); afaE8 (afimbrial adhesin VIII); fimH (type 1 fimbriae); cnf1 (cytotoxic necrotizing factor); cdtB (cytolethal distending toxin); ireA (siderophore receptor); sat (secreted autotransporter toxin); astA (S-like enterotoxin); iroN (siderophore receptor); fyuA (yersiniabactin receptor); kpsM II, K1, and K2 (kpsM II variants; group 2 capsule); kpsM III (group 3 capsule); rfc (O4 lipopolysaccharide synthesis); cvaC (colicin V); traT (serum-resistance associated outer membrane protein); ibeA (invasion of brain endothelium); ompT (outer membrane protease T); iss (increased serum survival); usp (uropathogenic specific protein); malX (marker for pathogenicity-associated island from strain CFT073); and H7 fliC variant (flagellin).