Volume 18, Number 3—March 2012
Dispatch
Escherichia coli O104:H4 Infections and International Travel
Table
Gene product | Function | Presence in ON-2011 | Presence in ON-2010 | Presence in EAEC 55989 |
---|---|---|---|---|
STEC | ||||
stx1 | Shiga toxin 1 | – | –- | – |
stx2 | Shiga toxin 2 | + | – | – |
EHEC-hlyA | EHEC hemolysin | – | – | – |
cdt(I–V) | Cytolethal distending toxin | – | – | – |
subAB | Subtilase cytotoxin | – | – | – |
espP | Serine protease EspP | – | – | – |
eae | Intimin | – | – | – |
iha | Iha (IrgA homologue adhesin) | + | Partial (5′ end 21%) | + |
lpfAO26 | Structural subunit of LPF of STEC O26 | + | + | + |
lpfAO113 | Structural subunit of LPF of STEC O113 | + | + | + |
lpfAO157–OI141 | Structural subunit of LPF of STEC O157:H7 (encoded on O island 141) | – | – | – |
lpfAO157–OI154 | Structural subunit of LPF of STEC O157:H7 (encoded on O island 154) | – | – | – |
saa | Saa (STEC autoagglutinating adhesin) | – | – | – |
sfpA | Structural subunit of Sfp fimbriae | – | – | – |
ter cluster | Tellurite resistance | + | – | – |
irp2 | Component of iron uptake system on HPI | + | + | + |
fyuA | Component of iron uptake system on HPI | + | + | + |
EAEC | ||||
aatA | EAEC virulence plasmid (pAA) | + | + | + |
aggA | Pilin subunit of aggregative adherence fimbriae I (AAF/I) | + | – | – |
agg3A | Pilin subunit of AAF/III | – | + | + |
aggR | Transcriptional regulator AggR | + | + | + |
aap | Dispersin | + | + | + |
set1 | Shigella enterotoxin 1 | + | + | + |
pic | Pic (protein involved in intestinal colonization) | + | + | + |
astA | EAEC heat-stable enterotoxin 1 (EAST1) | – | + | + |
EPEC | ||||
bfpA | Bundle-forming pili | – | – | – |
ETEC | ||||
elt | Heat-labile enterotoxin (LT) | – | – | – |
estla | Heat-stable enterotoxin (STIa) | – | – | – |
estlb | Heat-stable enterotoxin (STIb) | – | – | – |
EIEC | ||||
ial | Invasive plasmid (pInv) | – | – | – |
*Derived from (11). EAEC, enteroaggregative Escherichia coli; STEC, Shiga- toxigenic E. coli; EHEC, enterohemorrhagic; LPF, long polar fimbriae; EPEC, enteropathogenic E. coli; ETEC, enterotoxigenic E. coli; EIEC, enterinvasive E. coli.
References
- World Health Organization. Outbreaks of E. coli O104:H4 infection: update 30. 2011 [cited 2011 July 29]. http://www.euro.who.int/en/what-we-do/health-topics/emergencies/international-health-regulations/news/news/2011/07/outbreaks-of-e.-coli-o104h4-infection-update-30
- Brooks JT, Sowers EG, Wells JG, Greene KD, Griffin PM, Hoekstra RM, Non-O157 Shiga toxin–producing Escherichia coli infections in the United States, 1983–2002. J Infect Dis. 2005;192:1422–9. DOIPubMedGoogle Scholar
- Couturier MR, Lee B, Zelyas N, Chui L. Shiga-toxigenic Escherichia coli detection in stool samples screened for viral gastroenteritis in Alberta, Canada. J Clin Microbiol. 2011;49:574–8. DOIPubMedGoogle Scholar
- Gould LH, Bopp C, Strockbine N, Atkinson R, Baselski V, Body B, Recommendations for diagnosis of Shiga toxin–producing Escherichia coli infections by clinical laboratories. MMWR Recomm Rep. 2009;58(RR-12):1–14.PubMedGoogle Scholar
- Hadler JL, Clogher P, Hurd S, Phan Q, Mandour M, Bemis K, Ten-year trends and risk factors for non-O157 Shiga toxin–producing Escherichia coli found through Shiga toxin testing, Connecticut, 2000–2009. Clin Infect Dis. 2011;53:269–76. DOIPubMedGoogle Scholar
- Chui L, Couturier MR, Chiu T, Wang G, Olson AB, McDonald RR, Comparison of Shiga toxin-producing Escherichia coli detection methods using clinical stool samples. J Mol Diagn. 2010;12:469–75. DOIPubMedGoogle Scholar
- Pitout JD, Hamilton N, Church DL, Nordmann P, Poirel L. Development and clinical validation of a molecular diagnostic assay to detect CTX-M-type β-lactamases in Enterobacteriaceae. Clin Microbiol Infect. 2007;13:291–7. DOIPubMedGoogle Scholar
- Ribot EM, Fair M, Gautom R, Cameron D, Hunter S, Swaminathan B, Standardization of pulsed-field gel electrophoresis protocols for the subtyping of Escherichia coli O157: H7, Salmonella, and Shigella for PulseNet. Foodborne Pathog Dis. 2006;3:59–67. DOIPubMedGoogle Scholar
- Centers for Disease Control and Prevention. One-day (24–28 h) standardized laboratory protocol for molecular subtyping of Escherichia coli O157:H7, non-typhoidal Salmonella serotypes, and Shigella sonnei by pulsed-field gel electrophoresis (PFGE). Atlanta (GA): US Department of Health and Human Services; 2007.
- Touchon M, Hoede C, Tenaillon O, Barbe V, Baeriswyl S, Bidet P, Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths. PLoS Genet. 2009;5:e1000344. DOIPubMedGoogle Scholar
- Bielaszewska M, Mellmann A, Zhang W, Kock R, Fruth A, Bauwens A, Characterisation of the Escherichia coli strain associated with an outbreak of haemolytic uraemic syndrome in Germany, 2011: a microbiological study. Lancet Infect Dis. 2011;11:671–6.PubMedGoogle Scholar
- Bernier C, Gounon P, Le Bouguenec C. Identification of an aggregative adhesion fimbria (AAF) type III–encoding operon in enteroaggregative Escherichia coli as a sensitive probe for detecting the AAF-encoding operon family. Infect Immun. 2002;70:4302–11. DOIPubMedGoogle Scholar
- Health Protection Agency. LGP bioinformatics portal. 2011 [cited 2011 Jul 29]. http://www.hpa-bioinformatics.org.uk/lgp/genomes
- Rasko DA, Webster DR, Sahl JW, Bashir A, Boisen N, Scheutz F, Origins of the E. coli strain causing an outbreak of hemolytic-uremic syndrome in Germany. N Engl J Med. 2011;365:709–17. DOIPubMedGoogle Scholar
- Smith EA, Macfarlane GT. Enumeration of human colonic bacteria producing phenolic and indolic compounds: effects of pH, carbohydrate availability and retention time on dissimilatory aromatic amino acid metabolism. J Appl Bacteriol. 1996;81:288–302. DOIPubMedGoogle Scholar
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