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Volume 20, Number 8—August 2014
Dispatch

Rapid Detection, Complete Genome Sequencing, and Phylogenetic Analysis of Porcine Deltacoronavirus

Douglas MarthalerComments to Author , Lindsey Raymond, Yin Jiang, James Collins, Kurt Rossow, and Albert Rovira
Author affiliations: University of Minnesota Veterinary Diagnostic Laboratory, Saint Paul, Minnesota, USA

Main Article

Table 2

Nucleotide identities of porcine deltacoronavirus strains*

Strain Nucleotide identity, %
Genome ORF1 Spike Envelope Membrane Nucleocapsid NS6 NS7
HKU strains 99.1 99.1 98.8 100 99.4 99.6 98.9 99.3
HKU vs. US 98.9–99.2 98.9–99.4 98.5–98.8 99.2–99.6 98.9–99.2 98.8–99 98.9–100 98.8–99.0
US
 99.9–100
 99.9–100
 99.7–100
 99.6–100
 99.8–100
 99.4–100
 99.3–100
 99.2–100
*ORF, open reading frame; NS, nonstructural.

Main Article

Page created: April 29, 2014
Page updated: April 29, 2014
Page reviewed: April 29, 2014
The conclusions, findings, and opinions expressed by authors contributing to this journal do not necessarily reflect the official position of the U.S. Department of Health and Human Services, the Public Health Service, the Centers for Disease Control and Prevention, or the authors' affiliated institutions. Use of trade names is for identification only and does not imply endorsement by any of the groups named above.
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