Volume 21, Number 7—July 2015
Dispatch
Novel Arenavirus Isolates from Namaqua Rock Mice, Namibia, Southern Africa
Table 1
Small mammals captured in Namibia during 2010–2012 and tested for arenaviruses*
Mammal species | Common name | Localities of capture† | No. positive/no. tested |
---|---|---|---|
Aethomys chrysophilus | Red veld rat | Be, CCF, Ok, Pa, Ta | 0/64 |
Micaelamys namaquensis | Namaqua rock mouse | CCF, Ma, Ok, Pa, Ru | 4/266 |
Crocidura fuscomurina | Bicolored musk shrew | CCF, Pa, Ru | 0/4 |
Crocidura hirta | Lesser red musk shrew | Ma | 0/5 |
Dendromus melanotis | Gray climbing mouse | Ta | 0/1 |
Elephantulus intufi | Bushveld sengi | CCF, Ma, Ok | 0/14 |
Gerbilliscus spp. | Gerbil | Wi | 0/6 |
Gerbilliscus leucogaster | Bushveld gerbil | Be, CCF, Ma, Ok, Pa, Ru, Ta | 0/228 |
Gerbillurus paeba | Hairy-footed gerbil | Be | 0/3 |
Gerbillurus setzeri | Namib brush-tailed gerbil | Be | 0/1 |
Lemniscomys rosalia | Single-striped grass mouse | Be | 0/2 |
Mastomys spp. | Multimammate mouse | Be, CCF, Ma, Ok, Pa, Ru, Ta | 0/114 |
Mus indutus | Desert pygmy mouse | Ma, Pa | 0/5 |
Petromyscus collinus | Pygmy rock mouse | Pa | 0/3 |
Rhabdomys pumilio | Four-striped grass mouse | CCF, Ma, Pa, Ok, Wi | 0/73 |
Saccostomus campestris | Pouched mouse | Be, CCF, Ok, Pa, Ru | 0/17 |
Thallomys paedulcus | Acacia rat | Pa | 0/4 |
u.u. Soricidae |
Shrew |
Wi |
0/2 |
Total | 4/812 |
*Morphologic species identification of the arenavirus positive rodent samples was confirmed by sequencing of partial mitochondrial cytochrome b gene (GenBank accession nos.: N27, KP752173; N73, KP752175; N80, KP752176; N85, KP752174).
†Abbreviations and sampling dates for trapping localities: Be, Ben Hur (11/2011); CCF, Cheetah Conservation Fund (02/2011); Ok, Okahandja (06/2012), Pa, Palmwag (09/2010), Ta, Talismanis (12/2011), Ma, Mariental (06/2012), Ru, Rundu (01/2011),Wi, Windhoek (09/2010 and 01/2012).