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Volume 21, Number 8—August 2015
Research

Phylogeography of Influenza A(H3N2) Virus in Peru, 2010–2012

Simon PollettComments to Author , Martha I. Nelson, Matthew R. Kasper, Yeny Tinoco, Mark Simons, Candice Romero, Marita Silva, Xudong Lin, Rebecca A. Halpin, Nadia B. Fedorova, Timothy B. Stockwell, David Wentworth, Edward C. Holmes, and Daniel G. Bausch
Author affiliations: University of California San Francisco, California, USA (S. Pollett); United States Naval Medical Research Unit No. 6, Lima, Peru (S. Pollett, M. Kasper, Y. Tinoco, M. Simons, C. Romero, M. Silva, D.G. Bausch); University of Sydney, Sydney, New South Wales, Australia (S. Pollett, E.C. Holmes); National Institutes of Health, Bethesda, Maryland, USA (M.I. Nelson); Arizona State University, Tempe, Arizona, USA (M.I. Nelson); J. Craig Venter Institute, Rockville, Maryland, USA (X. Lin, R.A. Halpin, N. Fedorova, T.B. Stockwell, D. Wentworth); Tulane School of Public Health and Tropical Medicine, New Orleans, Louisiana, USA (D.G. Bausch)

Main Article

Figure 2

Maximum likelihood phylogeny of hemagglutinin sequences of influenza A(H3N2) viruses from Peru and other global locations, rooted on the oldest available sequence (A/Hong Kong/CUHK52390/2004). Clades containing strains from Peru and a neighboring country are indicated by the letters a–c, designating Bolivia (a), Chile (b), and Ecuador (c). The letter d indicates phylogenetic evidence of migration from Peru to North America, with onward transmission after seeding that region. Scale bar indicates

Figure 2. Maximum likelihood phylogeny of hemagglutinin sequences of influenza A(H3N2) viruses from Peru and other global locations, rooted on the oldest available sequence (A/Hong Kong/CUHK52390/2004). Clades containing strains from Peru and a neighboring country are indicated by the letters a–c, designating Bolivia (a), Chile (b), and Ecuador (c). The letter d indicates phylogenetic evidence of migration from Peru to North America, with onward transmission after seeding that region. Scale bar indicates number of nucleotide substitutions per site.

Main Article

Page created: July 14, 2015
Page updated: July 14, 2015
Page reviewed: July 14, 2015
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