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Volume 22, Number 12—December 2016
Dispatch

Reemergence of St. Louis Encephalitis Virus, California, 2015

Gregory S. White1, Kelly Symmes1, Pu Sun, Ying Fang, Sandra Garcia, Cody Steiner, Kirk Smith, William K. Reisen, and Lark L. CoffeyComments to Author 
Author affiliations: Coachella Valley Mosquito and Vector Control District, Indio, California, USA (G.S. White); School of Veterinary Medicine, University of California, Davis, California (K. Symmes, P. Sun, Y. Fang, S. Garcia, C. Steiner, W.K. Reisen, L.L. Coffey); Environmental Services Department, Maricopa County, Phoenix, Arizona, USA (K. Smith)

Main Article

Table

Primers used to sequence complete genomes of SLEV in study of reemergence of the virus in Arizona and California, USA, 2015*

Name Sequence, 5′ → 3′ Location of primer binding site at 5′ nucleotide on SLEV 2005 isolate CbAr4005†
2300F GGATTACACAGGGACTACTTGG 2339
2300R TCTGTATGCTCTCCCACATTAAG 2672
2700F CCTGAAGAAGCTGGAAGATGAG 2786
2700R CGCTTTCAATAACGCCATCAC 3175
5700F GGTGATTCAGCTAAACAGGAAGA 5753
5700R GTGATTGCCATGGGTCCATTA 5936
800F CAATCCTGGATATGCCCTAGTT 852
800R ACGGTCCACAACATCTCTTT 1241
9000F CCAAAGTTCTGGGAAATGGTTG 8981
9000R CATAGGAATTCTCACGGCTCAT 9189
F1 GAGCGGAGAGGAAACAGATTT 17
F10 CGGAGCTGTGACTCTTGATTT 4976
F11 AGGCCGTATTGGGAGAAATC 5981
F12 CACGACGCAGTATGTGAACT 7099
F13 GGAGTGGACGTGTTCCATAA 8069
F15 GAGTGAACACCATGCCAAATC 9099
F16 TGGTAGGAGGAGTGCTGTAA 10393
F2 GGAGAAGTCATGGCTGGTAAA 1584
F3 CCCTGGAGTGAAGGAGAAATAAC 3276
F4 GGGTTCCCAACTACCAAGTTTA 5431
F7 GGTTGAGTGGCTAAGGAAGAA 9635
F8 CATTCTTGGCGGGTTTGTTC 3796
F9 GCAATAGCTGGGCTGATGTA 4315
R1 CGCTGGTCGCTAGAAAGATTAG 2488
R10 CGGAGCTGTGACTCTTGATTT 5418
R12 CAGATAGCCCTGCTTCCTTTAG 9099
R2 AGCACACAAGATGGGAAGAG 3985
R3 GAAGCTGGTGATCCACTCATAC 5651
R4 ACGATTCCGTCTTTCCTGTATG 7761
R5 GCCCACTCCTGTTCTGTTTATC 8417
R6 CATCCTGCTCCTGGTGAAAT 9924
R7 CCTGTCTTTCCAGGTGTCAATA 3185
R8 GGGATTGACCGTAACCAATCT 2023

*SLEV, St. Louis encephalitis virus.
†GenBank accession no. FJ753286.2.

Main Article

1These authors contributed equally to this article.

Page created: November 18, 2016
Page updated: November 18, 2016
Page reviewed: November 18, 2016
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