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Volume 22, Number 6—June 2016
Synopsis

Integration of Genomic and Other Epidemiologic Data to Investigate and Control a Cross-Institutional Outbreak of Streptococcus pyogenes

Victoria J. Chalker, Alyson Smith, Ali Al-Shahib, Stella Botchway, Emily Macdonald, Roger Daniel, Sarah Phillips, Steven Platt, Michel Doumith, Rediat Tewolde, Juliana Coelho, Keith A. Jolley, Anthony Underwood, and Noel McCarthyComments to Author 
Author affiliations: Public Health England, Colindale, UK (V.J. Chalker, A. Al-Shahib, R. Daniel, S. Phillips, S. Platt, M. Doumith, R. Tewolde, J. Coelho, A. Underwood); South East England Public Health England Centre, Chilton, UK (A. Smith, S. Botchway, E. Macdonald, N.D. McCarthy); University of Oxford Department of Zoology, Oxford, UK (K.A. Jolley, N.D. McCarthy); University of Warwick, Warwick Medical School, Coventry, UK (N.D. McCarthy)

Main Article

Figure 2

Genetic relatedness of isolates from a cross-institutional Streptococcus pyogenes outbreak in Oxfordshire, United Kingdom (indicated by TV plus isolate number); an outbreak described by Turner et al. (20) (indicated by TR and TO plus isolate number for reference and outbreak isolates, respectively); and 3 geographic outbreak clusters in the United Kingdom around the time of the TV outbreak (indicated by X, Y, or Z plus isolate number). Dendrograms are based on a single-nucleotide polymorphism ma

Figure 2. Genetic relatedness of isolates from a cross-institutional Streptococcus pyogenes outbreak in Oxfordshire, United Kingdom (indicated by TV plus isolate number); an outbreak described by Turner et al. (20) (indicated by TR and TO plus isolate number for reference and outbreak isolates, respectively); and 3 geographic outbreak clusters in the United Kingdom around the time of the TV outbreak (indicated by X, Y, or Z plus isolate number). Dendrograms are based on a single-nucleotide polymorphism maximum-likelihood phylogenetic tree constructed by using RAxML (29) (A) and on a neighbor-joining tree constructed from the allelic differences distance matrix (B). Scale bars indicate 10 single-nucleotide polymorphism differences (A) and 15 allelic differences (B).

Main Article

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Main Article

CrossRef reports the first author should be "High" not "Jordan" in reference 12 "Jordan, Richards, Burton, Thigpen, Van Beneden, 2007".

Reference has only first page number. Please provide the last page number if article is longer than one page. (in reference 30 "Jolley, Maiden, 2010").

CrossRef reports the year should be "2014" not "2015" in reference 37 "Davies, Holden, Coupland, Chen, Venturini, Barnett, et al., 2015".

Reference has only first page number. Please provide the last page number if article is longer than one page. (in reference 40 "Milne, Lamagni, Efstratiou, Foley, Gilman, Lilley, et al., 2011").

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The conclusions, findings, and opinions expressed by authors contributing to this journal do not necessarily reflect the official position of the U.S. Department of Health and Human Services, the Public Health Service, the Centers for Disease Control and Prevention, or the authors' affiliated institutions. Use of trade names is for identification only and does not imply endorsement by any of the groups named above.
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