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Volume 23, Number 2—February 2017
Research

Detection of Multiple Parallel Transmission Outbreak of Streptococcus suis Human Infection by Use of Genome Epidemiology, China, 2005

Pengcheng Du1, Han Zheng1, Jieping Zhou1, Ruiting Lan1, Changyun Ye, Huaiqi Jing, Dong Jin, Zhigang Cui, Xuemei Bai, Jianming Liang, Jiantao Liu, Lei Xu, Wen Zhang, Chen Chen, Jianguo XuComments to Author , and Chen
Author affiliations: State Key Laboratory for Infectious Disease Prevention and Control, Beijing, China (P. Du, H. Zheng, H. Jing, D. Jin, Z. Cui, X. Bai, L. Xu, W. Zhang, C. Chen, J. Xu); Academy of Sciences of China Institute of Remote Sensing and Digital Earth, Beijing (J. Zhou, J. Liang, J. Liu); University of New South Wales School of Biotechnology and Biomolecular Sciences, Sydney, Australia (R. Lan); Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Beijing (C. Ye, J. Xu); National Institute for Communicable Disease Control and Prevention, Beijing (D. Jin)

Main Article

Figure 2

Minimum spanning tree of 6 clades of Streptococcus suis minimum core genome type 1 sequence type 7 implicated in outbreak of human infections, Sichuan Province, China, 2005. Solid black lines indicate only 1 single-nucleotide polymorphism between the 2 isolates. Differences of >1 SNP between isolates are displayed by dashed black lines with numbers. Numbers in circles are names of isolates. Epidemiologically interesting (EI) group 1: SC261 and SC264; EI 2: SC202, SC212, SC214, and SC328; EI 3

Figure 2. Minimum spanning tree of 6 clades of Streptococcus suis minimum core genome type 1 sequence type 7 implicated in outbreak of human infections, Sichuan Province, China, 2005. Solid black lines indicate only 1 single-nucleotide polymorphism between the 2 isolates. Differences of >1 SNP between isolates are displayed by dashed black lines with numbers. Numbers in circles are names of isolates. Epidemiologically interesting (EI) group 1: SC261 and SC264; EI 2: SC202, SC212, SC214, and SC328; EI 3: SC256, SC260, and SC331; EI 4: SC89, SC222, SC224, SC276, SC308, SC329, and SC357; EI 5: SC153 and SC311; EI 6: SC3, SC5, SC7, SC22, SC39, SC50, SC304, and SC338; EI 7: SC16 and SC17; EI 8: SC69, SC84, SC179, and SC333.

Main Article

1These authors contributed equally to this article.

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