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Volume 23, Number 7—July 2017
Research

Phylogeography of Burkholderia pseudomallei Isolates, Western Hemisphere

Jay E. GeeComments to Author , Christopher A. Gulvik, Mindy G. Elrod, Dhwani Batra, Lori A. Rowe, Mili Sheth, and Alex R. Hoffmaster
Author affiliations: Centers for Disease Control and Prevention, Atlanta, Georgia, USA

Main Article

Table 1

Phylogeographic analysis of 26 isolates of Burkholderia pseudomallei from the Western Hemisphere by whole-genome sequencing*

Isolate GenBank accession no. Origin Patient travel or residence Year isolated MLST type ITS type
7894 CP018373,CP018374 Ecuador Unknown 1960 11 G
724644 CP018377,CP018378,CP018379 Massachusetts, USA Aruba 2012 698 G
CA2007 CP018418,CP018419 California, USA Unknown 2007 518 G
CA2009 CP018380,CP018381 California, USA Mexico 2009 95 G
CA2010 CP018382,CP018383 California, USA Unknown 2010 550 C
CA2013a CP018398,CP018399 California, USA Unknown 2013 518 G
FL2012 CP018391,CP018392 Florida, USA Trinidad 2012 297 G
GA2015 CP018416,CP018417 Georgia, USA Panama and Peru 2015 436 G
IL2014 CP018414,CP018415 Illinois, USA Mexico 2014 92 G
MD2013 MPSL01000000 Maryland, USA Africa 2013 1053 C
MX2013 CP018395,CP018396,CP018397 California, USA Mexico and Vietnam 2013 297 G
MX2014 CP018410,CP018411 California, USA Mexico 2014 951 G
NY2010 CP018384,CP018385,CP018386 New York, USA Aruba 2010 698 G
OH2013 CP018400,CP018401 Ohio, USA None 2013 17 CE
PB 1007001 CP018387,CP018388 Arizona, USA Costa Rica 2009 518 G
PR1982 CP018367,CP018368 Puerto Rico, USA Unknown 1982 NA G
PR1998 CP018369,CP018370 Puerto Rico, USA Unknown 1998 92 G
PR2012 CP018393,CP018394 Puerto Rico, USA Unknown 2012 297 G
PR2013a CP018406,CP018407 Puerto Rico, USA, soil 1 None 2013 297 G
PR2013b CP018408,CP018409 Puerto Rico, USA, soil 2 None 2013 297 G
RI2013a CP018402,CP018403 Rhode Island, USA Guatemala 2013 1038 G
RI2013b CP018404,CP018405 Rhode Island, USA Guatemala 2013 1038 G
Swiss2010 CP018389,CP018390 Switzerland Martinique 2010 92 G
TX2004 CP018375,CP018376 Texas, USA Southeast Asia 2004 297 G
TX2015 CP018412,CP018413 Texas, USA Mexico 2015 92 G
VEN1976 CP018371,CP018372 Venezuela Unknown 1976 12 G

*ITS, internal transcribed spacer; MLST, multilocus sequence typing; NA, not available (allele for gltB was not resolvable by conventional Sanger sequencing or whole-genome analysis).

Main Article

Page created: June 20, 2017
Page updated: June 20, 2017
Page reviewed: June 20, 2017
The conclusions, findings, and opinions expressed by authors contributing to this journal do not necessarily reflect the official position of the U.S. Department of Health and Human Services, the Public Health Service, the Centers for Disease Control and Prevention, or the authors' affiliated institutions. Use of trade names is for identification only and does not imply endorsement by any of the groups named above.
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