Volume 23, Number 7—July 2017
Research
Phylogeography of Burkholderia pseudomallei Isolates, Western Hemisphere
Jay E. Gee
, Christopher A. Gulvik, Mindy G. Elrod, Dhwani Batra, Lori A. Rowe, Mili Sheth, and Alex R. Hoffmaster
, Christopher A. Gulvik, Mindy G. Elrod, Dhwani Batra, Lori A. Rowe, Mili Sheth, and Alex R. Hoffmaster
Table 2
Reference genomes of Burkholderia pseudomallei strains from the Western Hemisphere used for phylogeographic analysis
| Strain | Origin | GenBank accession no. |
|---|---|---|
| 576 | Thailand | ACCE01000000 |
| 350105 | Hainan, China | CP012093, CP012094 |
| 1026b | Thailand | CP002833, CP002834 |
| 11–1617 | Madagascar | SRR3145392 |
| 11–1696 | Madagascar | SRR3145393 |
| 1258a | Thailand | AHJB01000000 |
| 1710b | Thailand | CP000124, CP000125 |
| 406e | Thailand | AAMM02000000 |
| 4900CF | Brazil | ARZE01000000 |
| A79C | Papua New Guinea | JQHQ01000000 |
| ABCPW1 | Australia | JQIJ01000001 |
| BCC215 | Brazil | ABBR01000000 |
| BEL2013 | Madagascar | SRR3145396 |
| BF103 | Burkina Faso | SRR3145394 |
| BF111 | Burkina Faso | SRR3145395 |
| Bp1651 | California, USA, by way of Australia | CP012041, CP012042 |
| Bp22 | Singapore | AFBJ01000000 |
| BPC006 | China | NC_018527, NC_018529 |
| K96243 | Thailand | NC_006350, NC_006351 |
| MSHR1655 | Australia | AAHR02000000 |
| MSHR305 | Australia | CP006469, CP006470 |
| MSHR3709 | Australia | JRFK01000000 |
| MSHR5107 | Malaysia | JZXP01000001 |
| MSHR5613 | Australia | JQDK01000000 |
| MSHR5848 | Australia | AVAJ01000000 |
| MSHR5858 | Australia | AVAK01000000 |
| MSHR668 | Australia | CP000570, CP000571 |
| NCTC13179 | Australia | NC_022658, NC_022659 |
| Pasteur52237 | Vietnam | AAHV02000000 |
| PB08298010 | Arizona, USA | ARZO01000000 |
| PHLS14 | Philippines | ABBJ01000000 |
| PHLS9 | Pakistan | ABBL01000000 |
| S13 | Singapore | AAHW02000000 |
| T4 | Australia | JPNO01000000 |
| VEL | Malaysia | APLI01000000 |
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Page updated: June 20, 2017
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