Volume 23, Number 9—September 2017
Research
Real-Time Whole-Genome Sequencing for Surveillance of Listeria monocytogenes, France
Table 3
cgMLST cluster-alert size, no. human isolates | No. (%) |
||||
---|---|---|---|---|---|
Clusters, n = 119 | Human isolates, n = 770 | Food/environment isolates, n = 1,973 | Clusters with confirmed source | Cluster-alerts with identified source resulting in withdrawal or recall | |
Small, 1 | 37 (31) | 37 (5) | 145 (7) | 10 (27) | 3 (30) |
Medium, 2–5 | 73 (61) | 185 (24) | 123 (6) | 9 (12) | 5 (55) |
Large, >5 | 9 (8) | 89 (12) | 83 (4) | 3 (38) | 0 |
*cgMLST, core genome multilocus sequence typing.
1These authors contributed equally to this article.
2These authors were co-senior authors.
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