Volume 25, Number 11—November 2019
Research Letter
Canine Distemper Virus in Asiatic Lions of Gujarat State, India
Table
GenBank accession no. | Source | Geographic location | Year | Lineage | H gene | Complete genome |
---|---|---|---|---|---|---|
MK037459 | Asiatic lion |
Gir National Park, Gujarat State, India |
2018 |
100.0 | 100.0 | |
MK037460 | 100.0 | 100.0 | ||||
MK037461 | 100.0 | 100.0 | ||||
MK037462 | 100.0 | 99.9 | ||||
MK037463 | 100.0 | 99.9 | ||||
MK037464 | 100.0 | 99.9 | ||||
MK037465 | 100.0 | 100.0 | ||||
MK037466 | 100.0 | 100.0 | ||||
MK037467 | 100.0 | 100.0 | ||||
MK037468 |
100.0 |
100.0 |
||||
KU578257.1 | Dog | Africa | 1994 | East African | 96.1 | 96.6 |
MH496778.1 | Dog | Thailand | 2014 | Asia 4 | 94.5 | 94.1 |
KJ466106.1 | Raccoon dog | China | 2012 | Asia 1 | 94.0 | 94.1 |
AY649446.1 | Racoon | USA | 2001 | America 2 | 94.9 | 94.9 |
AY466011.2 | Racoon | USA | 1998 | America 1 | 93.0 | 94.0 |
AY386316.1 | Dog | Germany | NA | Europe | 95.9 | 94.8 |
AB475099.1 | Dog | Japan | NA | Asia 2 | 93.4 | 94.1 |
KC479141.1 | Dog | India | 2012 | 97.1 | NA | |
KC479140.1 | Tiger | India | 2012 | 96.9 | NA | |
KC479139.1 | Tiger | India | 2012 | 97.1 | NA | |
KC479138.1 | Red panda | India | 2013 | 97.4 | NA | |
LC011103.1 |
Dog |
India |
2012 |
97.4 |
NA |
|
Vaccine strains | ||||||
AF378705.1 CDV strain Onderstepoort | 92.4 | 92.1 | ||||
EU726268.1 CDV strain CDV3 | 92.6 | 92.0 | ||||
Z35493.1CDV Convac | 92.0 | NA |
*Reference sample is GenBank accession no. MK037469. NA, not available. GenBank accession nos. MK037459–68 represent sequence data from this study.
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