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Volume 25, Number 12—December 2019
Dispatch

Distantly Related Rotaviruses in Common Shrews, Germany, 2004–2014

Reimar JohneComments to Author , Simon H. Tausch, Josephine Grützke, Alexander Falkenhagen, Corinna Patzina-Mehling, Martin Beer, Dirk Höper, and Rainer G. Ulrich
Author affiliations: German Federal Institute for Risk Assessment, Berlin, Germany (R. Johne, S.H. Tausch, J. Grützke, A. Falkenhagen, C. Patzina-Mehling); Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany (M. Beer, D. Höper, R.G. Ulrich); Deutsches Zentrum für Infektionsforschung, partner site Hamburg-Lübeck-Borstel-Insel Riems, Germany (R.G. Ulrich)

Main Article

Figure 2

Phylogenetic relationship of shrew rotaviruses (bold), Germany, 2011–2012, with RVA–RVJ determined by using the deduced amino acid sequences of virus protein 1 (A), virus protein 6 (B), and nonstructural protein 5 (C). Trees were constructed by using a neighbor-joining method implemented in the MegAlign module of DNASTAR (https://www.dnastar.com) and a bootstrap analysis with 1,000 trials and 111 random seeds. Bootstrap values of >50% are shown. The rotavirus species, host, strain or sample d

Figure 2. Phylogenetic relationship of shrew rotaviruses (bold), Germany, 2011–2012, with RVA–RVJ determined by using the deduced amino acid sequences of virus protein 1 (A), virus protein 6 (B), and nonstructural protein 5 (C). Trees were constructed by using a neighbor-joining method implemented in the MegAlign module of DNASTAR (https://www.dnastar.com) and a bootstrap analysis with 1,000 trials and 111 random seeds. Bootstrap values of >50% are shown. The rotavirus species, host, strain or sample designation, and GenBank accession number are indicated at each branch. Scale bars indicate amino acid substitutions per 100 residues. *Sequence incomplete at N terminus (≈70 aa residues missing) and C terminus (≈10 aa residues missing). †Sequence incomplete at N terminus (≈40 aa residues missing). Ca, canine; Ch, chicken; Hu, human; RVA, rotavirus A; RVB, rotavirus B; RVC, rotavirus C; RVD, rotavirus D; RVF, rotavirus F; RVG, rotavirus G; RVH, rotavirus H; RVI, rotavirus I; RVJ, rotavirus J; Si, simian.

Main Article

Page created: November 18, 2019
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