Volume 25, Number 6—June 2019
Dispatch
Pertactin-Negative and Filamentous Hemagglutinin-Negative Bordetella pertussis, Australia, 2013–2017
Table
Prn deficiency mechanism | Position in prn† | prn allele type | State (no. of isolates) | Year (no. isolates) | References |
---|---|---|---|---|---|
IS481F | 1613 | prn2 | Western Australia (32) | 2013 (13) | (1) |
New South Wales (10) | 2014 (5) | ||||
2015 (11) | |||||
2016 (9) | |||||
2017 (4) |
|||||
IS481R | 1613 | prn2 | Western Australia (12) | 2013 (6) | (1) |
New South Wales (5) | 2014 (5) | ||||
2015 (4) |
|||||
IS481F | 1598 | prn3 | Western Australia (3) | 2013 (1) | This study |
2014 (2) |
|||||
IS1002R | 1613 | prn2 | Western Australia (4) | 2013 (2) | (1) |
2016 (1) | |||||
2017 (1) |
|||||
Deletion | −297 to 1325 | Not determined‡ | Western Australia (2) | 2014 (1) | (8), newly found in Australia |
2015 (1) |
|||||
Stop codon |
223 |
prn2 |
Western Australia (1) |
2014 (1) |
(10), newly found in Australia |
Deletion | 2020–2023 | prn2 | Western Australia (1) | 2013 (1) | This study |
*F/R denotes IS insertion orientation relative to prn. F, forward; IS, insertion sequence; Prn, pertactin; R, reverse.
†The nucleotide positions are relative to the initiation codon (ATG) of the prn in Tohama I.
‡prn allele type was not determinable because the repeat regions that define prn allele type was deleted in this mechanism.
References
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