Volume 25, Number 7—July 2019
Research
Mitochondrial Junction Region as Genotyping Marker for Cyclospora cayetanensis
Table 2
Distribution of Cyclospora cayetanensis mitochondrial junction types detected in epidemiologically linked samples, United States*
Collection state and year | Epidemiologic known link to case cluster/outbreak | Sample no. | International travel within 2 weeks before symptom onset | Cmt type |
---|---|---|---|---|
Maine 2014 |
Maine temporospatial cluster† |
HCME548_14 | No | Cmt184.C |
HCME550_14 | No | Cmt184.C | ||
HCME552_14 | No | Cmt184.C | ||
HCME298_14 |
No |
Cmt184.C |
||
Michigan 2014 | Michigan event-associated cluster |
HCMI030_14 | Unknown | Cmt154.B |
HCMI040_14 | No | Cmt184.D | ||
HCMI029_14 | No | Cmt184.B | ||
HCMI039_14 | Unknown | Cmt184.B | ||
Pennsylvania 2014 |
HCPA556_14 | No | Cmt184.B | |
HCPA962_14 |
Unknown |
Cmt169.A |
||
South Carolina 2014 |
South Carolina temporospatial cluster† |
HCSC052_14 | No | Cmt154.A |
HCSC053_14 | No | Cmt154.A | ||
HCSC054_14 |
No |
Cmt154.A |
||
Texas 2015 |
Mexican event-associated cluster | HCTX208_15 | Mexico/Tulum | Cmt154.A |
HCTX219_15 | Mexico/Tulum | Cmt154.A | ||
HCTX220_15 | Mexico/Tulum | Cmt154.A | ||
HCTX547_15 | Mexico/Tulum | Cmt154.A | ||
Texas household cluster‡ | HCTX354_15 | Mexico/Riviera Maya | Cmt154.A | |
HCTX355_15 | Mexico/Riviera Maya | Cmt154.A | ||
Texas restaurant-associated cluster 2015-A | HCTX353_15 | No | Cmt154.A | |
HCTX540_15 | No | Cmt154.B | ||
HCTX551_15 | No | Cmt154.B | ||
HCTX555_15 | No | Cmt154.B | ||
Texas restaurant-associated cluster 2015-B | HCTX356_15 | No | Cmt154.B | |
HCTX357_15 | No | Cmt154.B | ||
Texas local business-associated cluster |
HCTX204_15 | Mexico/Cozumel | Cmt154.B | |
HCTX205_15 | No | Cmt154.B | ||
HCTX206_15 | No | Cmt154.B | ||
HCTX538_15 |
No |
Cmt154.B |
||
Wisconsin 2015 |
Wisconsin restaurant-associated cluster 2015 |
HCWI001_15 | No | Cmt154.A |
HCWI003_15 | No | Cmt154.A | ||
HCWI002_15 | No | Cmt169.B | ||
HCWI004_15 | No | Cmt169.B | ||
HCWI005_15 | No | Cmt169.B | ||
HCWI006_15 |
No |
Cmt169.B |
||
Texas 2016 | Texas restaurant-associated cluster 2016 | HCTX471_16 | No | Cmt154.A |
HCTX474_16 | No | Cmt154.A |
*Cmt, Cyclospora mitochondrial junction.
†The terminology temporospatial cluster is used here for cases that were not linked to a particular establishment or event but were temporally and geographically clustered.
‡Case-patients were a married couple who traveled together to Riviera Maya, Mexico, during their incubation period. Because they did not spend the entire 14-d incubation period in Mexico, it is unclear whether they became infected in Texas or Mexico.