Volume 28, Number 4—April 2022
Dispatch
Zoonotic Pathogens in Wildlife Traded in Markets for Human Consumption, Laos
Table 1
Organism | No. positive/no. tested |
Sequencing identity match, %† | |||
---|---|---|---|---|---|
Animals | Species | Samples | Sample types | ||
Leptospira spp. | 65/324 | Callosciurus finlaysonii squirrel, 13/28 | 72/461 | URO, 58/312 | NA |
C. erythraeus squirrel, 8/56 | SPL, 1/3 | ||||
Paradoxurus hermaphroditus civet, 10/22 | KID, 2/6 | ||||
C. inornatus squirrel, 7/34 | LIV, 1/40 | ||||
Dremomys rufigenis squirrel, 5/35 | BLD, 9/85 | ||||
Menetes berdmorei ground squirrel, 4/29 | URI, 1/15 | ||||
Rhizomys pruinosus rat, 3/21 | |||||
Arctogalidia trivirgata civet, 2/2 | |||||
Petaurista philippensis flying squirrel, 1/9 | |||||
Atherurus macrourus porcupine, 1/1 | |||||
Belomys pearsonii flying squirrel, 1/12 | |||||
Eonycteris spelaea bat, 1/3 | |||||
Hylopetes alboniger flying squirrel, 1/5 | |||||
H. phayrei flying squirrel, 1/9 | |||||
H. spadiceus flying squirrel, 1/2 | |||||
Muntiacus muntjak deer, 1/1 | |||||
Paguma larvata civet, 1/2 | |||||
Prionailurus bengalensis cat, 1/3 | |||||
Rhizomys sumatrensis rat, 1/6 | |||||
Tupaia belangeri treeshrew, 1/3 | |||||
Unknown Sciuridae squirrel, 1/2 |
|||||
Rickettsia spp. |
1/41 |
P. philippensis flying squirrel, 1/2 |
1/68 |
LIV, 1/40 |
NA |
Rickettsia felis† | 2/41 | D. rufigenis squirrel, 1/11 | 2/68 | LIV, 2/40 | 98–100 |
P. hermaphroditus civet, 1/6 |
|||||
R. typhi† |
1/41 |
D. rufigenis squirrel, 1/11 |
1/68 |
LIV, 1/40 |
93 |
Anaplasma platys† |
1/41 |
P. hermaphroditus civet, 1/6 |
1/68 |
KID, 1/6 |
98 |
A. centrale |
1/41 |
M. muntjak deer, 1/1 |
5/68 |
KID, 1/6 |
98.8–99.6 (A. centrale) |
A. capra |
LIV, 3/40 |
98.8–99.6 (A. capra) |
|||
A. marginale† | SPL, 1/3 | 98.8 (A. marginale) |
*BLD, blood; KID, kidney; LIV, liver; NA, not applicable; SPL, spleen; URI, urine; URO, urogenital swab. †Organism identified by sequencing of PCR products and identity match given in the right-hand column. All nucleotide sequences were submitted to GenBank under accession nos. MW407963–MW407984 and MW411434–MW411439.
1These first authors contributed equally to this article.
2Current affiliation: Menzies School of Health Research, Darwin, Northern Territory, Australia.
3Current affiliation: Campus Biotech, Geneva, Switzerland; University of Oxford Centre for Tropical Medicine and Global Health, Oxford, UK.
4Current affiliation: James Cook University, Townsville, Queensland, Australia.
5Current affiliation: Institut Pasteur de Madagascar, Antananarivo, Madagascar.
6These authors contributed equally to this article.