Volume 28, Number 4—April 2022
Dispatch
Zoonotic Pathogens in Wildlife Traded in Markets for Human Consumption, Laos
Table 2
Organism | No. positive/no. tested |
Sequencing identity match, %† | |||
---|---|---|---|---|---|
Animals | Species | Samples | Sample types | ||
Leptospira spp. | 9/35 | Callosciurus finlaysonii squirrel, 1/1 | 46/256 | SPL, 17/69 | NA |
Callosciurus erythraeus squirrel, 4/17 | KID, 14/91 | ||||
Callosciurus inornatus squirrel, 2/6 | LIV, 14/92 | ||||
Petaurista philippensis flying squirrel, 1/5 | BLD, 1/3 | ||||
Catopuma temminckii cat, 1/1 |
|||||
Orientia tsutsugamushi |
2/34 |
C. erythraeus squirrel, 2/17 |
2/252 |
SPL, 2/252 |
NA |
Rickettsia spp. | 12/35 | C. erythraeus squirrel, 5/17 | 70/252 | LIV, 30/92 | NA |
P. philippensis flying squirrel, 2/5 | KID, 25/91 | ||||
C. inornatus squirrel, 2/6 | SPL, 15/69 | ||||
Paradoxurus hermaphroditus civet, 1/2 | |||||
Catopuma temminckii cat, 1/1 | |||||
Ratufa bicolor squirrel, 1/1 |
|||||
Rickettsia conorii† |
1/35 |
P. philippensis flying squirrel, 1/5 |
1/252 |
LIV, 1/92 |
99 |
R. felis† | 1/35 | C. erythraeus squirrel, 1/17 | 2/252 | LIV, 1/92 | 98 |
SPL, 1/69 |
|||||
R. typhi | 6/35 | C. erythraeus squirrel, 6/17 | 7/252 | KID, 4/91 | NA |
LIV, 2/92 | |||||
SPL, 1/69 |
|||||
Anaplasmataceae | 1/34 | C. erythraeus squirrel, 1/17 | 3/252 | KID, 2/91 | NA |
SPL, 1/69 |
|||||
Anaplasma bovis† | 1/34 | C. erythraeus squirrel, 1/17 | 7/252 | KID, 1/91 | 99.7–100 |
LIV, 3/92 | |||||
SPL, 3/69 |
|||||
A. phagocytophilum† | 2/34 | Catopuma temminckii cat, 1/1 | 4/252 | KID, 2/91 | 98–99 |
P. philippensis flying squirrel, 1/4 |
SPL, 2/69 |
||||
Ehrlichia spp./E. chaffeensis† |
1/34 | Unknown Muridae rat, 1/1 | 1/252 | SPL, 1/69 | 97 (Ehrlichia spp.) |
97 (E. chaffeensis) |
|||||
Kurthia populi† |
1/34 |
C. erythraeus squirrel, 1/17 |
1/252 |
LIV, 1/92 |
98 |
Lactococcus garvieae† | 1/34 | C. erythraeus squirrel, 1/17 | 1/252 | SPL, 1/69 | 99 |
*BLD, blood; KID, kidney; LIV, liver; NA, not applicable; POFI, Provincial Office of Forestry Inspection; SPL, spleen; URI, urine; URO, urogenital swab. †Organism identified by sequencing of PCR products and identity match given in righthand column. All nucleotide sequences were submitted to GenBank under accession nos. MW407963–MW407984 and MW411434–MW411439.
1These first authors contributed equally to this article.
2Current affiliation: Menzies School of Health Research, Darwin, Northern Territory, Australia.
3Current affiliation: Campus Biotech, Geneva, Switzerland; University of Oxford Centre for Tropical Medicine and Global Health, Oxford, UK.
4Current affiliation: James Cook University, Townsville, Queensland, Australia.
5Current affiliation: Institut Pasteur de Madagascar, Antananarivo, Madagascar.
6These authors contributed equally to this article.