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Volume 29, Number 1—January 2023
Dispatch

Genomic Microevolution of Vibrio cholerae O1, Lake Tanganyika Basin, Africa

Yaovi M.G. Hounmanou, Elisabeth Njamkepo, Jean Rauzier, Karin Gallandat, Aurélie Jeandron, Guyguy Kamwiziku, Klaudia Porten, Francisco Luquero, Aaron Aruna Abedi, Baron Bashige Rumedeka, Berthe Miwanda, Martin Michael, Placide Welo Okitayemba, Jaime Mufitini Saidi, Renaud Piarroux, François-Xavier Weill, Anders Dalsgaard, and Marie-Laure QuiliciComments to Author 
Author affiliations: University of Copenhagen, Frederiksberg, Denmark (Y.M.G. Hounmanou, A. Dalsgaard); Institut Pasteur, Université Paris Cité, Paris, France (E. Njamkepo, J. Rauzier, F.-X. Weill, M.-L. Quilici); London School of Hygiene and Tropical Medicine, London, UK (K. Gallandat, A. Jeandron); University of Kinshasa, Kinshasa, Democratic Republic of the Congo (G. Kamwiziku); Epicentre, Paris (K. Porten, F. Luquero); Ministry of Public Health, Kinshasa (A. Aruna Abedi, P. Welo Okitayemba); Ministry of Public Health, Uvira, Democratic Republic of the Congo (B. Bashige Rumedeka, J. Mufitini Saidi); Institut National de Recherche Biomédicale, Kinshasa (B. Miwanda); Sokoine University of Agriculture College of Veterinary Medicine and Biomedical Sciences, Morogoro, Tanzania (M. Michael); Sorbonne Université, Inserm UMR 1136, Assistance Publique-Hôpitaux de Paris, Hôpital Pitié-Salpêtrière, Paris (R. Piarroux)

Main Article

Figure 2

A) Spatiotemporal dynamics of the AFR10 clades of Vibrio cholerae O1 in the African Great Lakes Region, Africa, 1998–2020. Circle size indicates the number of isolates at the location concerned. The 5 AFR10 clades are color-coded: AFR10a, brown; AFR10b, yellow; AFR10c, green; AFR10d, pink; and AFR10e, blue. B) V. cholerae O1 isolates from the Lake Tanganyika basin. All AFR10 isolates from Bujumbura (Burundi), Kigoma (Tanzania) and the South-Kivu province (DRC) were considered to be Lake Tanganyika basin isolates.

Figure 2. A) Spatiotemporal dynamics of the AFR10 clades of Vibrio cholerae O1 in the African Great Lakes Region, Africa, 1998–2020. Circle size indicates the number of isolates at the location concerned. The 5 AFR10 clades are color-coded: AFR10a, brown; AFR10b, yellow; AFR10c, green; AFR10d, pink; and AFR10e, blue. B) V. cholerae O1 isolates from the Lake Tanganyika basin. All AFR10 isolates from Bujumbura (Burundi), Kigoma (Tanzania) and the South-Kivu province (DRC) were considered to be Lake Tanganyika basin isolates.

Main Article

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Page updated: December 22, 2022
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