Volume 11, Number 9—September 2005
Research
Molecular Epidemiology of SARS-associated Coronavirus, Beijing
Table 2
Epidemiologic and phylogenetic data on 29 severe acute respiratory syndrome patients, Beijing, 2003*
Patient no. (sex, age [y]) | Onset date† | Sampling date,† clinical sample | 5-loci genotype | Other variant loci |
---|---|---|---|---|
1‡ (M, 25) | 3/10 | 4/28, Sp | GGCTC | 22589 |
2‡§ (F, 48) | 3/21 | 4/28, Sp | GGCTC | 22589, 27749 |
3 (M, 19) | 3/31 | 4/28, Sp; 5/5, Sp | GGCTC | 22589 |
4‡ (F, 34) | 3/31 | 5/5, St; 4/28, Sp | TGTTT | 17620, 22589 |
5‡§ (M, 21) | 3/31 | 4/28, Sp; 5/5, Sp | TGTTT | 22589 |
6‡ (F, 34) | 4/2 | 4/28, Sp | TGTTT | 22077 |
7 (F, 27) | 4/2 | 4/28, Sp | GGCTC | 22589 |
8‡ (M, 31) | 4/3 | 4/28, Sp | TGTTT | 22077, 22589, 27749 |
9‡ (M, 20) | 4/5 | 5/5, Sp; 4/28, Sp | TGTTT | 17620, 22077, 22589 |
10 (F, 23) | 4/8 | 5/22, St; 5/15, Sp | GGCTC | 22589 |
11§ (M, 47) | 4/8 | 5/5-Sp; 5/5, St | GGCTC | 22589 |
12 (M, 73) | 4/9 | 4/28, Sp; 4/28, St | TGTTT | 22589, 27749 |
13 (M, 54) | 4/9 | 4/28, Sp; 4/28, St | GGCTC | 22589, 27749 |
14‡ (F, 21) | 4/11 | 4/28, Sp; 4/28, St; 5/5, Sp | TGTTT | |
15§ (M, 61) | 4/12 | 5/22, Sp | GATTC | 22589 |
16‡ (F, 25) | 4/15 | 5/5, Sp | TGTTT | 17620, 22589, 27749 |
17 (M, 25) | 4/17 | 5/5, Sp | TGTTT | 22077, 22589, 27749 |
18 (F, 20) | 4/18 | 4/28, Sp; 4/28, St | TGTTT | 22589, 27749 |
19‡ (F, 25) | 4/20 | 5/5, Sp; 5/5, St | TGTTT | 22077, 22589, |
20 (F, 34) | 4/21 | 4/28, Sp; 5/5, Sp | TGTTT | 22077 |
21 (M, 33) | 4/23 | 5/5, Sp; 5/5 St; 4/28-Sp | TGTTT | 17620, 22589 |
22 (M, 28) | 4/24 | 5/5, Sp | TGTTT | 22589, 27749 |
23 (M, 61) | 5/1 | 5/15, Sp | GATTC | 22589 |
24‡ (F, 31) | 5/1 | 5/5, Sp | TGTTT | 22077, 2589, 7749 |
25 (M, 25) | 5/2 | 5/7, Sp | TGTTT | 22077 |
26‡ (M, 25) | 5/4 | 5/22, Sp | TGTTT | 22077 |
27 (M, 19) | 5/6 | 5/22, Sp | TGTTT | 22589, 27749 |
28 (F, 28) | 5/7 | 5/22, Sp | TGTTT | 17620, 22589, 27749 |
29 (M, 22) | 5/12 | 4/28, Sp; 5/5, Sp | TGTTT | 22589, 27749 |
*F, female; M, male; Sp, sputum; St, stool.
†All dates are in 2003.
‡Patients were from the same cluster.
§Patients with adverse clinical outcome.