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Volume 12, Number 4—April 2006

Identifying Influenza Viruses with Resequencing Microarrays

Zheng Wang*†, Luke T. Daum‡, Gary J. Vora*, David Metzgar§, Elizabeth A. Walter¶, Linda C. Canas‡, Anthony P. Malanoski*, Baochuan Lin*, and David A. Stenger*Comments to Author 
Author affiliations: *Naval Research Laboratory, Washington, DC, USA; †NOVA Research Inc., Alexandria, Virginia, USA; ‡Air Force Institute for Operational Health, Brooks City Base, San Antonio, Texas, USA; §Naval Health Research Center, San Diego, California, USA; ¶Lackland Air Force Base, San Antonio, Texas, USA

Main Article

Table 1

Influenza sequences tiled on the respiratory pathogen microarray version 1

Gene Prototype GenBank accession no. Tiled region Length (bp)
A/HA1 A/New Caledonia/20/99 (H1N1) AJ344014 110–808 699
A/HA3 A/Denmark/59/03 (H3N2) AY531939 120–913 794
A/HA5 A/Hong Kong/486/97 (H5N1) AF102671 1106–1629 524
A/NA1 A/Chile/1/83 (H1N1) X15281 4–1363 1,360
A/NA2 A/Panama/2007/99 (H3N2) AJ457937 1–1446 1,446
A/M A/NWS/33 (H1N1) L25814 1–923 923
B/HA B/Yamanashi/166/98 AF100355 269–952 684
B/NA B/Yamagata/16/88 AY1139081 1–896 896
B/M B/Yamagata/16/88 AF100378 1–362 362

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