Volume 12, Number 4—April 2006
Research
Identifying Influenza Viruses with Resequencing Microarrays
Zheng Wang*†, Luke T. Daum‡, Gary J. Vora*, David Metzgar§, Elizabeth A. Walter¶, Linda C. Canas‡, Anthony P. Malanoski*, Baochuan Lin*, and David A. Stenger*
Table 1
Influenza sequences tiled on the respiratory pathogen microarray version 1
| Gene | Prototype | GenBank accession no. | Tiled region | Length (bp) |
|---|---|---|---|---|
| A/HA1 | A/New Caledonia/20/99 (H1N1) | AJ344014 | 110–808 | 699 |
| A/HA3 | A/Denmark/59/03 (H3N2) | AY531939 | 120–913 | 794 |
| A/HA5 | A/Hong Kong/486/97 (H5N1) | AF102671 | 1106–1629 | 524 |
| A/NA1 | A/Chile/1/83 (H1N1) | X15281 | 4–1363 | 1,360 |
| A/NA2 | A/Panama/2007/99 (H3N2) | AJ457937 | 1–1446 | 1,446 |
| A/M | A/NWS/33 (H1N1) | L25814 | 1–923 | 923 |
| B/HA | B/Yamanashi/166/98 | AF100355 | 269–952 | 684 |
| B/NA | B/Yamagata/16/88 | AY1139081 | 1–896 | 896 |
| B/M | B/Yamagata/16/88 | AF100378 | 1–362 | 362 |
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