Volume 13, Number 8—August 2007
Dispatch
Rotavirus G5P[6] in Child with Diarrhea, Vietnam
Kamruddin Ahmed*
, Dang Duc Anh†, and Osamu Nakagomi*
, Dang Duc Anh†, and Osamu Nakagomi*
Table 2
Percentage identity of the partial amino acid and nucleotide sequences of VP8* genes of KH210 and selected rotavirus P[6] strains*
| Strain (lineage) | Species (country) | Deduced amino acid identity, % | Nucleotide identity, % |
|---|---|---|---|
| M37 (Ia) | Human (Venezuela) | 90 | 89 |
| 221/04–7 (Ib) | Porcine (Italy) | 94 | 92 |
| 134/04–10 (Ic) | Porcine (Italy) | 95 | 93 |
| ES51/04 (Id) | Porcine (Spain) | 92 | 91 |
| Gottfried (II) | Porcine (USA) | 85 | 82 |
| AU19 (III) | Human (Japan) | 87 | 81 |
| BP1198/98 (IV) | Human (Hungary) | 90 | 86 |
| BP1227/02 (V) | Human (Hungary) | 88 | 85 |
*The amino acid and nucleotide sequence identity of VP8* genes of KH210 and KH228 were 99%. The amino acid sequence identity of VP8* genes between KH228 and Gottfried was 84%. Otherwise, the identity of amino acid and nucleotide sequences of VP8* genes of KH228 and selected rotavirus P[6] strains were same as for KH210. GenBank accession nos.: M37, L20877; 221/04–7, AY955303; 134/04–10, AY955299; ES51/04, AY955306; Gottfried, M33516; AU19, AB017917; BP1198/98, AJ621504; BP1227/02, AJ621505.
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