Volume 16, Number 6—June 2010
Research
Rift Valley Fever during Rainy Seasons, Madagascar, 2008 and 2009
Soa Fy Andriamandimby, Armand Eugène Randrianarivo-Solofoniaina, Elisabeth M. Jeanmaire, Lisette Ravololomanana, Lanto Tiana Razafimanantsoa, Tsanta Rakotojoelinandrasana, Josette Razainirina, Jonathan Hoffmann, Jean-Pierre Ravalohery, Jean-Théophile Rafisandratantsoa, Pierre E. Rollin, and Jean-Marc Reynes1
Table
Features of 46 sequenced Rift Valley fever viruses, Madagascar, 2008–2009
| Code | Species | Sample type | Sampling date | District of sampling | Coding sequences |
||
|---|---|---|---|---|---|---|---|
| Small | Medium | Large | |||||
| 212-08 | Human | Serum | 2008 Jan 30 | Tolagnaro | Yes | Yes | Yes |
| 406-08 | Bovine | Fetal liver | 2008 Feb 20 | Miarinarivo | Yes | Yes | Yes |
| 413-08 | Bovine | Fetal liver | 2008 Feb 20 | Antsirabe II | Yes | Yes | Yes |
| 427-08 | Human | Serum | 2008 Feb 22 | Anjozorobe | Yes | Yes | Yes |
| 428-08 | Human | Serum | 2008 Feb 15 | Anjozorobe | Yes | Yes | Yes |
| 435-08 | Bovine | Serum | 2008 Feb 22 | Anjozorobe | Yes | No | Yes |
| 437-08 | Bovine | Serum | 2008 Feb 22 | Anjozorobe | Yes | No | No |
| 448-08 | Human | Serum | 2008 Feb 26 | Anjozorobe | Yes | Yes | Yes |
| 449-08 | Human | Serum | 2008 Feb 26 | Anjozorobe | Yes | No | Yes |
| 619-08 | Human | Serum | 2008 Mar 9 | Ankazobe | Yes | Yes | Yes |
| 682-08 | Human | Serum | 2008 Mar 12 | Ambatondrazaka | Yes | Yes | Yes |
| 683-08 | Human | Serum | 2008 Mar 12 | Ambatondrazaka | Yes | Yes | Yes |
| 684-08 | Human | Serum | 2008 Mar 12 | Ambatondrazaka | Yes | Yes | Yes |
| 693-08 | Human | Serum | 2008 Mar 11 | Amparafaravola | Yes | Yes | Yes |
| 776-08 | Human | Serum | 2008 Mar 14 | Ambatondrazaka | Yes | Yes | Yes |
| 779-08 | Human | Serum | 2008 Mar 16 | Amparafaravola | Yes | No | Yes |
| 845-08 | Human | Serum | 2008 Mar 23 | Manjakandriana | Yes | Yes | Yes |
| 846-08 | Human | Serum | 2008 Mar 23 | Manjakandriana | Yes | Yes | Yes |
| 847-08 | Human | Serum | 2008 Mar 23 | Manjakandriana | Yes | Yes | Yes |
| 848-08 | Human | Serum | 2008 Mar 23 | Manjakandriana | Yes | Yes | Yes |
| 849-08 | Human | Serum | 2008 Mar 23 | Manjakandriana | Yes | Yes | Yes |
| 850-08 | Human | Serum | 2008 Mar 23 | Manjakandriana | Yes | Yes | No |
| 851-08 | Human | Serum | 2008 Mar 23 | Manjakandriana | Yes | Yes | Yes |
| 852-08 | Human | Serum | 2008 Mar 23 | Manjakandriana | Yes | Yes | Yes |
| 853-08 | Human | Serum | 2008 Mar 23 | Manjakandriana | Yes | Yes | Yes |
| 854-08 | Human | Serum | 2008 Mar 23 | Manjakandriana | Yes | Yes | Yes |
| 855-08 | Bovine | Serum | 2008 Mar 24 | Manjakandriana | Yes | Yes | Yes |
| 856-08 | Bovine | Serum | 2008 Mar 24 | Manjakandriana | Yes | No | Yes |
| 857-08 | Bovine | Serum | 2008 Mar 24 | Manjakandriana | Yes | No | No |
| 859-08 | Bovine | Serum | 2008 Mar 24 | Manjakandriana | Yes | No | Yes |
| 863-09 | Human | Serum | 2008 Mar 25 | Antananarivo | Yes | Yes | Yes |
| 878-09 | Human | Serum | 2008 Mar 26 | Amparafaravola | Yes | Yes | Yes |
| 879-08 | Human | Serum | 2008 Mar 26 | Manjakandriana | Yes | Yes | Yes |
| 889-08 | Human | Serum | 2008 Mar 26 | Manjakandriana | Yes | Yes | No |
| 892-09 | Human | Serum | 2008 Mar 26 | Manjakandriana | Yes | Yes | Yes |
| 895-09 | Human | Serum | 2008 Mar 26 | Manjakandriana | Yes | Yes | Yes |
| 897-08 | Human | Serum | 2008 Mar 26 | Manjakandriana | Yes | Yes | Yes |
| 1464-08 | Human | Serum | 2008 Mar 28 | Tolagnaro | Yes | Yes | Yes |
| 1585-08 | Caprine | Serum | 2008 Apr 13 | Antsiranana I | Yes | Yes | Yes |
| 1586-08 | Human | Serum | 2008 Apr 15 | Antavy Atsimo | Yes | Yes | Yes |
| 1627-08 | Bovine | Serum | 2008 Apr 18 | Ambalavao | Yes | Yes | Yes |
| 1695-08 | Ovine | Serum | 2008 Apr 20 | Antsiranana II | Yes | Yes | Yes |
| 1730-08 | Bovine | Spleen | 2008 Apr 25 | Fianarantsoa I | Yes | Yes | Yes |
| 2032-08 | Human | Serum | 2008 May 25 | Amparafaravola | Yes | Yes | Yes |
| 2033-08 | Human | Serum | 2008 Apr 29 | Amparafaravola | Yes | Yes | Yes |
| 2034-08 | Human | Serum | 2008 Apr 23 | Amparafaravola | Yes | Yes | Yes |
| 6510-08 | Bovine | Liver | 2008 Dec 1 | Fianarantsoa I | Yes | Not done | Not done |
| 6546-08 | Bovine | Liver | 2008 Nov 28 | Fianarantsoa I | Yes | Not done | Not done |
| 6547-08 | Bovine | Liver | 2008 Nov 29 | Fianarantsoa II | Yes | Not done | Not done |
| 6660-08 | Human | Serum | 2008 Dec 12 | Fianarantsoa I | Yes | Not done | Not done |
Page created: February 10, 2011
Page updated: February 10, 2011
Page reviewed: February 10, 2011
The conclusions, findings, and opinions expressed by authors contributing to this journal do not necessarily reflect the official position of the U.S. Department of Health and Human Services, the Public Health Service, the Centers for Disease Control and Prevention, or the authors' affiliated institutions. Use of trade names is for identification only and does not imply endorsement by any of the groups named above.