Identification of Intermediate in Evolutionary Model of Enterohemorrhagic Escherichia coli O157
Christian Jenke, Shana R. Leopold, Thomas Weniger, Jörg Rothgänger, Dag Harmsen, Helge Karch, and Alexander Mellmann
Author affiliations: Institute for Hygiene and National Consulting Laboratory on Hemolytic Uremic Syndrome, Münster, Germany (C. Jenke, S.R. Leopold, H. Karch, A. Mellmann); University Hospital Münster Periodontology, Münster (T. Weniger, D. Harmsen); Ridom GmbH, Münster (J. Rothgänger)
Main Article
Table
Fifty strains used for SNP typing of enterohemorrhagic Escherichia coli O157*
Strain ID |
Year of isolation |
Illness |
SF status and serotype |
Subgroup/cluster† |
Reference and/or GenBank accession no. |
TB182A‡ |
1991 |
D |
SF O55:H7 |
A |
(12) |
CB9615‡ |
2003 |
D |
SF O55:H7 |
A |
NC_013941 |
493/89‡ |
1989 |
HUS |
SF O157:H– |
B |
(16) |
87–14‡ |
1987 |
HUS |
NSF O157:H7 |
C1 |
(12) |
EC4115‡ |
2006 |
BD |
NSF O157:H7 |
C1 |
NC_011353 |
TW14359‡ |
2006 |
BD |
NSF O157:H7 |
C1 |
NC_013008 (12,17) |
TW14588‡ |
2006 |
BD |
NSF O157:H7 |
C3 |
NZ_ABKY00000000.2 |
86–24‡ |
1986 |
HUS |
NSF O157:H7 |
C2 |
(12) |
Sakai‡ |
1996 |
D |
NSF O157:H7 |
C3 |
NC_002695 (18) |
EDL933‡ |
1983 |
NA |
NSF O157:H7 |
C3 |
(14) |
LSU-61 |
2001 |
NA |
SF O157:H7 |
Unknown intermediate |
(10,13) |
SNPO157_01 |
1987 |
HUS |
NSF O157:H7 |
C1 |
This study |
SNPO157_02 |
1988 |
D |
NSF O157:H7 |
C1 |
This study |
SNPO157_03 |
1988 |
HUS |
SF O157:H– |
B |
This study |
SNPO157_04 |
1990 |
HUS |
NSF O157:H7 |
C1 |
This study |
SNPO157_05 |
1991 |
HUS |
NSF O157:H– |
C3 |
This study |
SNPO157_06 |
1992 |
HUS |
NSF O157:H7 |
C3 |
This study |
SNPO157_07 |
1993 |
HUS |
NSF O157:H7 |
C1 |
This study |
SNPO157_08 |
1995 |
HUS |
NSF O157:H7 |
C1 |
This study |
SNPO157_09 |
1995 |
HUS |
SF O157:H– |
B |
This study |
SNPO157_10 |
1996 |
HUS |
NSF O157:H– |
C1 |
This study |
SNPO157_11 |
1996 |
HUS |
SF O157:H– |
B |
This study |
SNPO157_12 |
1996 |
HUS |
SF O157:H– |
B |
This study |
SNPO157_13 |
1996 |
HUS |
NSF O157:H7 |
C1 |
This study |
SNPO157_14 |
1997 |
HUS |
NSF O157:H7 |
C1 |
This study |
SNPO157_15 |
1997 |
HUS |
NSF O157:H7 |
C1 |
This study |
SNPO157_16 |
1998 |
HUS |
NSF O157:H7 |
C1 |
This study |
SNPO157_17 |
1999 |
HUS |
NSF O157:H7 |
C1 |
This study |
SNPO157_18 |
1999 |
HUS |
NSF O157:H7 |
C3 |
This study |
SNPO157_19 |
2000 |
HUS |
NSF O157:H7 |
C1 |
This study |
SNPO157_20 |
2000 |
D |
NSF O157:H7 |
C3 |
This study |
SNPO157_21 |
2001 |
HUS |
SF O157:H– |
B |
This study |
SNPO157_22 |
2001 |
HUS |
NSF O157:H– |
C3 |
This study |
SNPO157_23 |
2002 |
D |
NSF O157:H7 |
C3 |
This study |
SNPO157_24 |
2002 |
A |
NSF O157:H7 |
C1 |
This study |
SNPO157_25 |
2003 |
HUS |
NSF O157:H7 |
C3 |
This study |
SNPO157_26 |
2004 |
HUS |
NSF O157:H7 |
C1 |
This study |
SNPO157_27 |
2005 |
HUS |
NSF O157:H7 |
C3 |
This study |
SNPO157_28 |
2005 |
BD |
NSF O157:H7 |
C3 |
This study |
SNPO157_29 |
2005 |
HUS |
NSF O157:H7 |
C1 |
This study |
SNPO157_30 |
2006 |
HUS |
NSF O157:H7 |
C3 |
This study |
SNPO157_31 |
2007 |
HUS |
NSF O157:H7 |
C3 |
This study |
SNPO157_32 |
2007 |
HUS |
NSF O157:H7 |
C3 |
This study |
SNPO157_33 |
2008 |
HUS |
NSF O157:H7 |
C3 |
This study |
SNPO157_34 |
2008 |
D |
SF O157:H– |
B |
This study |
SNPO157_35 |
2008 |
HUS |
SF O157:H– |
B |
This study |
SNPO157_36 |
2009 |
D |
NSF O157:H7 |
§ |
This study |
SNPO157_37 |
2009 |
HUS |
SF O157:H– |
B |
This study |
SNPO157_38 |
2010 |
HUS |
NSF O157:H7 |
C3 |
This study |
SNPO157_39 |
2010 |
HUS |
SF O157:H– |
B |
This study |
Main Article
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