Volume 18, Number 6—June 2012
Dispatch
Genome Analysis of Rift Valley Fever Virus, Mayotte
Catherine Cêtre-Sossah
, Hervé Zeller, Marc Grandadam, Valérie Caro, François Pettinelli, Michèle Bouloy, Eric Cardinale, and Emmanuel Albina
, Hervé Zeller, Marc Grandadam, Valérie Caro, François Pettinelli, Michèle Bouloy, Eric Cardinale, and Emmanuel Albina
Table A1
Strains analyzed in study of the genome analysis of Rift Valley fever virus, Mayotte
| Source of isolate | Virus strain | Country of origin | Year isolated | GenBank accession no. for small segment |
|---|---|---|---|---|
| Bovine | 763/70 | Zimbabwe | 1970 | DQ380174 |
| Bovine | 1260/78 | Zimbabwe | 1978 | DQ380164 |
| Bovine | 1853/78 | Zimbabwe | 1978 | DQ380168 |
| Bovine | 2250/74 | Zimbabwe | 1974 | DQ380143 |
| Bovine | 2269/74 | Zimbabwe | 1974 | DQ380173 |
| Bovine | 2373/74 | Zimbabwe | 1974 | DQ380159 |
| Human | 73HB1230 | Central African Republic | 1973 | DQ380172 |
| Human | 73HB1449 | Central African Republic | 1973 | DQ380162 |
| Human | 74HB59 | Central African Republic | 1974 | DQ380163 |
| Aedes cuminsi mosquito | ArD38388 | Burkina Faso | 1983 | DQ380181 |
| Hipposideros caffer bat | ANK3837 | Guinea | 1981 | DQ380165 |
| Micropterus pusillus bat | ANK6087 | Guinea | 1984 | DQ380166 |
| Human | CARR1622 | Central African Republic | 1985 | DQ380160 |
| Eretmapodites sp. mosquito | Entebbe | Uganda | 1944 | DQ380156 |
| Human | HvB375 | Central African Republic | 1985 | DQ380161 |
| Bovine | KenyaIB8 | Kenya | 1965 | DQ380176 |
| Ae. macintoshi mosquito | Kenya21445 | Kenya | 1983 | DQ380171 |
| Human | Kenya00523 | Kenya | 1998 | DQ380169 |
| Human | MgH824 | Madagascar | 1979 | DQ380144 |
| Human | OS1 | Mauritania | 1987 | DQ380180 |
| Human | OS3 | Mauritania | 1987 | DQ380178 |
| Human | OS8 | Mauritania | 1987 | DQ380177 |
| Human | OS9 | Mauritania | 1987 | DQ380179 |
| Ovine | SA51 | South Africa | 1951 | DQ380158 |
| Human | SA75 | South Africa | 1975 | DQ380175 |
| Human | Saudi10911 | Saudi Arabia | 2000 | DQ380170 |
| Bovine | ZC3349 | Egypt | 1978 | DQ380152 |
| Human | ZH501 | Egypt | 1977 | DQ380149 |
| Human | ZH548 | Egypt | 1977 | DQ380151 |
| Human | ZH1776 | Egypt | 1978 | DQ380153 |
| Mosquito | ZM657 | Egypt | 1978 | DQ380146 |
| Ovine | ZS6365 | Egypt | 1979 | DQ380145 |
| Human | Zinga | Central African Republic | 1969 | DQ380167 |
| Bovine | 0611MeruSouth | Kenya | 2007 | EU574078 |
| Bovine | 0094Garissa | Kenya | 2007 | EU574086 |
| Buffalo | 2820Garissa | Kenya | 2007 | EU574061 |
| Human | 2008/00099 | Mayotte | 2008 | HE687302 |
| Human | 2008/00101 | Mayotte | 2008 | HE687307 |
| Bovine | An1000 | Madagascar | 1991 | EU312108 |
| Human | 3162 | Madagascar | 2008 | JF311386 |
| Human | 3163 | Madagascar | 2008 | JF311387 |
| Human | 3164 | Madagascar | 2008 | JF311388 |
| Human | 3165 | Madagascar | 2008 | JF311389 |
| Bovine | 3168 | Madagascar | 2008 | JF311392 |
| Bovine | 3169 | Madagascar | 2008 | JF311393 |
| Bovine | 3170 | Madagascar | 2008 | JF311394 |
| Human | SPU10315 | Kenya | 2007 | EU312147 |
| Human | SPU384001 | Kenya | 1997 | EU312128 |
| Human | B1143 | Kenya | 1977 | EU312119 |
| Goat | 1811Garissa | Kenya | 2006 | EU574068 |
| Bovine | 1602Mombassa | Kenya | 2007 | EU574071 |
| Ovine | 473Kajaido | Kenya | 2007 | EU574080 |
| Ovine | 3644Baringo | Kenya | 2007 | EU574059 |
| Human | 004/006Garissa | Kenya | 2006 | HM586975 |
| Human | 035/07Barissa | Kenya | 2007 | HM586980 |
| Aedes sp. mosquito | 131B04/06Garissa | Kenya | 2006 | HM586983 |
| Aedes sp. mosquito | KLF091/07 | Kenya | 2007 | HM586984 |
| Human | Tanga001/007 | Tanzania | 2007 | HM586981 |
| Human | Dodoma002/07 | Tanzania | 2007 | HM586982 |
| Human | HB29 Phlebovirus | China | 2010 | HM745932 |
Page created: May 10, 2012
Page updated: May 10, 2012
Page reviewed: May 10, 2012
The conclusions, findings, and opinions expressed by authors contributing to this journal do not necessarily reflect the official position of the U.S. Department of Health and Human Services, the Public Health Service, the Centers for Disease Control and Prevention, or the authors' affiliated institutions. Use of trade names is for identification only and does not imply endorsement by any of the groups named above.