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Volume 20, Number 1—January 2014
Research

Genomic Epidemiology of Vibrio cholerae O1 Associated with Floods, Pakistan, 2010

Muhammad Ali Shah1, Ankur Mutreja1, Nicholas Thomson1, Stephen Baker, Julian Parkhill, Gordon Dougan, Habib Bokhari, and Brendan W. WrenComments to Author 
Author affiliations: COMSATS Institute of Information Technology, Islamabad, Pakistan (M.A. Shah, H. Bokhari); Wellcome Trust Sanger Institute, Cambridge, UK (A. Mutreja, N. Thomson, J. Parkhill, G. Dougan); Oxford University Clinical Research Unit, Ho Chi Mihn City, Vietnam (S. Baker); London School of Hygiene and Tropical Medicine, London, UK (M.A. Shah, S. Baker, B.W. Wren)

Main Article

Figure 2

Phylogenetic tree showing the relative position of Vibrio cholerae O1 El Tor from Pakistan in wave 3 of the seventh-pandemic lineage, based on single-nucleotide polymorphism differences. The blue, green, and red branches represent waves 1, 2, and 3 respectively. The colors of the subclade 1 and 2 isolates match the colors assigned to the strain isolation locations in Figure 1, panel A.

Figure 2. . Phylogenetic tree showing the relative position of Vibrio cholerae O1 El Tor from Pakistan in wave 3 of the seventh-pandemic lineage, based on single-nucleotide polymorphism differences. The blue, green, and red branches represent waves 1, 2, and 3 respectively. The colors of the subclade 1 and 2 isolates match the colors assigned to the strain isolation locations in Figure 1, panel A.

Main Article

1These authors contributed equally to this article.

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