Volume 23, Number 10—October 2017
Investigation of Outbreaks of Salmonella enterica Serovar Typhimurium and Its Monophasic Variants Using Whole-Genome Sequencing, Denmark
|Outbreak||No. human cases||Included/excluded compared with previously defined||Food/veterinary isolates||Sources||No. SNPs||Maximum SNP distance||SNP distance from nearest neighbor|
|D||7||+1/–2||4||Swine||2 (6)||2 (6)||3 (7)|
|E||20||+1/–5||13||Swine/cattle||6 (7)||3 (4)||3 (4)|
*Previous outbreaks shown in Table 1. SNPs in parentheses are derived from reanalysis of closely related clusters with an internal de novo assembled reference genome. SNP, single-nucleotide polymorphism.
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