Volume 23, Number 2—February 2017
Research
Spread and Evolution of Respiratory Syncytial Virus A Genotype ON1, Coastal Kenya, 2010–2015
James R. Otieno
, Everlyn M. Kamau, Charles N. Agoti, Clement Lewa, Grieven Otieno, Ann Bett, Mwanajuma Ngama, Patricia A. Cane, and D. James Nokes
, Everlyn M. Kamau, Charles N. Agoti, Clement Lewa, Grieven Otieno, Ann Bett, Mwanajuma Ngama, Patricia A. Cane, and D. James Nokes
Table 3
Temporal occurrence of respiratory syncytial virus A (RSV-A) variants (rows) detected in Kilifi, Kenya, 2010/2011–2014/2015
| Variant* | Genotype | Epidemic (no. variants/epidemic) |
||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| 2010/2011 |
2011/2012 |
2012/2013 |
2013/2014 |
2014/2015 |
||||||
| 17 | 15 | 13 | 12 | 29 | ||||||
| 1 | ON1 | |||||||||
| 2 | ON1 | |||||||||
| 3 | ON1 | |||||||||
| 4 | ON1 | |||||||||
| 5 | ON1 | |||||||||
| 6 | ON1 | |||||||||
| 7 | ON1 | |||||||||
| 8 | ON1 | |||||||||
| 9 | ON1 | |||||||||
| 10 | ON1 | |||||||||
| 11 | ON1 | |||||||||
| 12 | ON1 | |||||||||
| 13 | ON1 | |||||||||
| 14 | ON1 | |||||||||
| 15 | ON1 | |||||||||
| 16 | ON1 | |||||||||
| 17 | ON1 | |||||||||
| 18 | ON1 | |||||||||
| 19 | ON1 | |||||||||
| 20 | ON1 | |||||||||
| 21 | ON1 | |||||||||
| 22 | ON1 | |||||||||
| 23 | ON1 | |||||||||
| 24 | ON1 | |||||||||
| 25 | ON1 | |||||||||
| 26 | ON1 | |||||||||
| 27 | ON1 | |||||||||
| 28 | ON1 | |||||||||
| 29 | ON1 | |||||||||
| 30 | ON1 | |||||||||
| 31 | ON1 | |||||||||
| 32 | ON1 | |||||||||
| 33 | ON1 | |||||||||
| 34 | ON1 | |||||||||
| 35 | GA2 | |||||||||
| 36 | GA2 | |||||||||
| 37 | GA2 | |||||||||
| 38 | GA2 | |||||||||
| 39 | GA2 | |||||||||
| 40 | GA2 | |||||||||
| 41 | GA2 | |||||||||
| 42 | GA2 | |||||||||
| 43 | GA2 | |||||||||
| 44 | GA2 | |||||||||
| 45 | GA2 | |||||||||
| 46 | GA2 | |||||||||
| 47 | GA2 | |||||||||
| 48 | GA2 | |||||||||
| 49 | GA2 | |||||||||
| 50 | GA2 | |||||||||
| 51 | GA2 | |||||||||
| 52 | GA2 | |||||||||
| 53 | GA2 | |||||||||
| 54 | GA2 | |||||||||
| 55 | GA2 | |||||||||
| 56 | GA2 | |||||||||
| 57 | GA2 | |||||||||
| 58 | GA2 | |||||||||
| 59 | GA2 | |||||||||
| 60 | GA2 | |||||||||
| 61 | GA2 | |||||||||
| 62 | GA2 | |||||||||
| 63 | GA2 | |||||||||
| 64 | GA2 | |||||||||
| 65 | GA2 | |||||||||
| 66 | GA2 | |||||||||
*A variant was defined as a group of viruses (when group includes a singleton) within a genotype that possesses ≥4 nt differences in the G ectodomain region than other viruses (see Methods). Dark blue, GA2; green, ON1.
Page created: January 17, 2017
Page updated: January 17, 2017
Page reviewed: January 17, 2017
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