Phenotypic and Genomic Analyses of Burkholderia stabilis Clinical Contamination, Switzerland
Helena M.B. Seth-Smith

, Carlo Casanova, Rami Sommerstein, Dominik M. Meinel
1, Mohamed M.H. Abdelbary
2, Dominique S. Blanc, Sara Droz, Urs Führer, Reto Lienhard, Claudia Lang, Olivier Dubuis, Matthias Schlegel, Andreas Widmer, Peter M. Keller
3, Jonas Marschall, and Adrian Egli
Author affiliations: University Hospital Basel, Basel, Switzerland (H.M.B. Seth-Smith, D.M. Meinel, A. Widmer, A. Egli); University of Basel, Basel (H.M.B. Seth-Smith, D.M. Meinel, A. Egli); University of Bern, Bern, Switzerland (C. Casanova, S. Droz); Bern University Hospital, Bern (R. Sommerstein, J. Marschall); Lausanne University Hospital, Lausanne, Switzerland (M.M.H. Abdelbary, D.S. Blanc); Biel Hospital, Biel, Switzerland (U. Führer); ADMED, La Chaux-de-Fonds, Switzerland (R. Lienhard); Viollier AG, Allschwil, Switzerland (C. Lang, O. Dubuis); Cantonal Hospital St. Gallen, St. Gallen, Switzerland (M. Schlegel); Swissnoso, National Center for Infection Prevention, Bern (M. Schlegel, A. Widmer, J. Marschall); University of Zurich, Zurich, Switzerland (P.M. Keller)
Main Article
Table 3
General properties of genome draft for Burkholderia stabilis strain CH16 from Switzerland*
Property |
Value |
Draft genome size, bp |
8,505,958 |
Chromosomes |
3 |
Chromosome sizes, bp |
3,705,321; 3,499,410; 1,230,432 |
Plasmid size, bp |
70,922 |
% G+C content |
66.3 |
Predicted CDSs (per chromosome and plasmid) |
7,629 (3,402; 3,068; 1,075; 84) |
Coding density |
86.40% |
Average gene length |
965 bp |
Pseudogenes |
20 |
rRNA operons |
6 |
tRNAs |
75 |
Insertion elements |
40 |
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Page created: May 20, 2019
Page updated: May 20, 2019
Page reviewed: May 20, 2019
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