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Volume 25, Number 6—June 2019

Phenotypic and Genomic Analyses of Burkholderia stabilis Clinical Contamination, Switzerland

Helena M.B. Seth-SmithComments to Author , Carlo Casanova, Rami Sommerstein, Dominik M. Meinel1, Mohamed M.H. Abdelbary2, Dominique S. Blanc, Sara Droz, Urs Führer, Reto Lienhard, Claudia Lang, Olivier Dubuis, Matthias Schlegel, Andreas Widmer, Peter M. Keller3, Jonas Marschall, and Adrian EgliComments to Author 
Author affiliations: University Hospital Basel, Basel, Switzerland (H.M.B. Seth-Smith, D.M. Meinel, A. Widmer, A. Egli); University of Basel, Basel (H.M.B. Seth-Smith, D.M. Meinel, A. Egli); University of Bern, Bern, Switzerland (C. Casanova, S. Droz); Bern University Hospital, Bern (R. Sommerstein, J. Marschall); Lausanne University Hospital, Lausanne, Switzerland (M.M.H. Abdelbary, D.S. Blanc); Biel Hospital, Biel, Switzerland (U. Führer); ADMED, La Chaux-de-Fonds, Switzerland (R. Lienhard); Viollier AG, Allschwil, Switzerland (C. Lang, O. Dubuis); Cantonal Hospital St. Gallen, St. Gallen, Switzerland (M. Schlegel); Swissnoso, National Center for Infection Prevention, Bern (M. Schlegel, A. Widmer, J. Marschall); University of Zurich, Zurich, Switzerland (P.M. Keller)

Main Article

Table 3

General properties of genome draft for Burkholderia stabilis strain CH16 from Switzerland*

Property Value
Draft genome size, bp 8,505,958
Chromosomes 3
Chromosome sizes, bp 3,705,321; 3,499,410; 1,230,432
Plasmid size, bp 70,922
% G+C content 66.3
Predicted CDSs (per chromosome and plasmid) 7,629 (3,402; 3,068; 1,075; 84)
Coding density 86.40%
Average gene length 965 bp
Pseudogenes 20
rRNA operons 6
tRNAs 75
Insertion elements 40

*CDSs, coding sequences.

Main Article

1Current affiliation: Genetics and Genomics at Roche, Basel, Switzerland.

2Current affiliation: RWTH Aachen University Hospital, Aachen, Germany.

3Current affiliation: University of Bern, Bern, Switzerland

Page created: May 20, 2019
Page updated: May 20, 2019
Page reviewed: May 20, 2019
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