Volume 26, Number 4—April 2020
Dispatch
Person-to-Person Transmission of Andes Virus in Hantavirus Pulmonary Syndrome, Argentina, 2014
Table 2
Comparison of Andes virus south variant nucleotide and deduced amino acid sequences from patients with hantavirus pulmonary syndrome, southwestern Argentina*
| Virus | Virus and genome segment |
||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| P2/P3 |
P1 |
NRC1 |
NRC2 |
ANDV-South AH1 strain |
ANDV-South Chile-9717869 |
||||||||||||||||||
| S | M | L | S | M | L | S | M | L | S | M | L | S | M | L | S | M | L | ||||||
| P2/P3 | 100.0 | 100.0 | 99.96 | 95.4 | 94.5 | 94.7 | 98.6 | 98.7 | 98.7 | 96.4 | 95.4 | NA | 93.2 | 94.0 | 93.6 | ||||||||
| P1 | 100.0 | 100.0 | 100.0 | 95.4 | 94.5 | 94.7 | 98.6 | 98.7 | 98.7 | 96.4 | 95.4 | NA | 93.2 | 94.0 | 93.6 | ||||||||
| NRC1 | 99.5 | 98.95 | 98.7 | 99.5 | 98.95 | 98.7 | 95.1 | 94.5 | 94.5 | 95.5 | 94.7 | NA | 92.7 | 95.4 | 94.4 | ||||||||
| NRC2 | 100.0 | 99.6 | 99.5 | 100.0 | 99.6 | 99.5 | 99.5 | 98.6 | 98.6 | 96.2 | 95.2 | NA | 93.1 | 94.2 | 94.1 | ||||||||
| ANDV-South AH1 strain | 100.0 | 98.4 | NA | 100.0 | 98.4 | NA | 99.5 | 98.8 | NA | 100.0 | 98.1 | NA | 93.3 | 94.5 | NA | ||||||||
| ANDV-South Chile-9717869 | 100.0 | 98.3 | 98.5 | 100.0 | 98.3 | 98.5 | 99.5 | 98.6 | 98.8 | 100.0 | 98.1 | 98.4 | 100.0 | 98.3 | NA | ||||||||
*Values above the spaces indicate percent nucleotide sequence identity, and values below the spaces indicate percent amino acid sequence identity. ANDV, Andes virus; L, large; M, medium; NA, not available; S, small. ANDV-South AH1, GenBank accession nos.: AF004660 (S); AF324901 (M); L: not available; ANDV-South Chile-9717869, GenBank accession nos.: AF291702 (S); AF291703 (M); AF291704 (L); ANDV-South P1, GenBank accession nos.: MN850083 (S), MN850088 (M), MN850093 (L); ANDV-South P2: GenBank accession nos.: MN850084 (S), MN850089 (M), MN850094 (L); ANDV-South P3, GenBank accession nos.: MN850085 (S), MN850090 (M), MN850095 (L); ANDV-South NRC1, GenBank accession nos.: MN850086 (S), MN850091 (M), MN850096 (L); ANDV-South NRC2, GenBank accession nos.: MN850087 (S), MN850092 (M), MN850097 (L).