Detection in Orchards of Predominant Azole-Resistant Candida tropicalis Genotype Causing Human Candidemia, Taiwan
Kuo-Yun Tseng
1, Yin-Zhi Chen
1, Zi-Li Zhou, Jyh-Nong Tsai, Min-Nan Tseng, Hsing-Lung Liu, Chi-Jung Wu, Yu-Chieh Liao, Chih-Chao Lin, De-Jiun Tsai, Feng-Jui Chen, Li-Yun Hsieh, Kuan-Chung Huang, Chun-Hua Huang, Kai-Ting Chen, Wen-Li Chu, Chiao-Mei Lin, Shu-Man Shih, Chao Agnes Hsiung, Yee-Chun Chen, Huey-Kang Sytwu, Yun-Liang Yang, and Hsiu-Jung Lo
Author affiliation: National Tsing Hua University, Hsinchu, Taiwan (K.-Y. Tseng); National Health Research Institutes, Miaoli, Taiwan (K.-Y. Tseng, Y.-Z. Chen, Z.-L. Zhou, C.-J. Wu, Y.-C. Liao, C.-C. Lin, D.-J. Tsai, F.-J. Chen, L.-Y. Hsieh, K.-C. Huang, C.-H. Huang, K.-T. Chen, W.-L. Chu, C.-M. Lin, S.-M. Shih, C.A. Hsiung, Y.-C. Chen, H.-K. Sytwu, H.-J. Lo); National Yang Ming Chiao Tung University, Hsinchu (Z.-L. Zhou, Y.-L. Yang, H.-J. Lo); Taiwan Agricultural Research Institute, Taichung, Taiwan (J.-N. Tsai); Kaohsiung District Agricultural Research and Extension Station, Pingtung, Taiwan (M.-N. Tseng); Taichung District Agricultural Research and Extension Station, CHangHua, Taiwan (H.-L. Liu); National Cheng Kung University Hospital and Medical College, Tainan, Taiwan (C.-J. Wu); National Taiwan University Hospital College of Medicine, Taipei, Taiwan (Y.-C. Chen); China Medical University, Taichung (H.-J. Lo)
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Figure 2
Figure 2. Phylogenetic analysis of Candida tropicalis in study of detection in orchards of predominant azole-resistant genotype causing human candidemia, Taiwan. Red numbers indicate fluconazole resistance at MICs of >8 mg/L. We conducted whole-genome sequencing of 31 isolates. Sequence comparisons indicated that all but 1 clade 4 isolate was fluconazole resistant and that isolates from orchards and patients were genetically related. Scale bar indicates nucleotide substitutions per site. ATCC, American Type Tissue Collection; DST, diploid sequence type, ND, not determined.
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