Volume 32, Number 5—May 2026
Dispatch
Severe Respiratory Illness and Death Associated with Outbreak of Human Rhinovirus B14 among Older Adults, France, 2024
Figure 3

Figure 3. Phylogenetic tree of HRV-B sequences circulating in Marseille during severe respiratory illness and death associated with outbreak of HRV-B14 among older adults, France, 2024. Viral protein 1–encoding gene sequence alignment was performed by using MUSCLE (https://www.ebi.ac.uk/Tools/msa/muscle) with standard parameters for nucleotide sequences. Blue background indicates the HRV-B14 sequences; red font indicates sequences obtained from the cluster of cases among older adults; green font indicates sequences obtained from other HRV RNA–positive samples detected in our laboratory during the same timeframe as the outbreak. All others sequences were downloaded from GenBank; accession numbers are indicated. The sequence obtained from patient P6 does not appear in this tree because it was a partial sequence and does not align with the genome region used in this analysis. The IQ-TREE software was used to build the tree with the general time-reversible model plus empirical base frequencies plus FreeRate model with 10 rate categories model identified as the most suitable by the best-fit model research module according to the Bayesian information criterion. A total of 10,000 ultra-fast bootstrap replicates were performed. Scale bar indicates nucleotide substitutions per site. HRV, human rhinovirus.