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Volume 23, Number 6—June 2017

Research

Genomic Analysis of Salmonella enterica Serovar Typhimurium DT160 Associated with a 14-Year Outbreak, New Zealand, 1998–2012

Samuel J. BloomfieldComments to Author , Jackie Benschop, Patrick J. Biggs1, Jonathan C. Marshall1, David T.S. Hayman1, Philip E. Carter1, Anne C. Midwinter, Alison E. Mather, and Nigel P. French
Author affiliations: Athor affiliations: Massey University, Palmerston North, New Zealand (S.J. Bloomfield, J. Benschop, P.J. Biggs, J.C. Marshall, D.T.S. Hayman, A.C. Midwinter, N.P. French); Institute of Environmental Science and Research, Wellington, New Zealand (P.E. Carter); University of Cambridge, Cambridge, UK (A.E. Mather)

Main Article

Figure 2

Relative effective population size (log scale) of Salmonella enterica serovar Typhimurium DT160 during an outbreak in New Zealand, 1998–2012. Population parameters were estimated using the Gaussian Markov random field Bayesian skyride model. The black line represents the median effective population size estimate; gray shading represents the 95% highest posterior density interval.

Figure 2. Relative effective population size (log scale) of Salmonella enterica serovar Typhimurium DT160 during an outbreak in New Zealand, 1998–2012. Population parameters were estimated using the Gaussian Markov random field Bayesian skyride model. The black line represents the median effective population size estimate; gray shading represents the 95% highest posterior density interval.

Main Article

1These authors contributed equally to this article.

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