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Volume 23, Number 8—August 2017
Synopsis

Added Value of Next-Generation Sequencing for Multilocus Sequence Typing Analysis of a Pneumocystis jirovecii Pneumonia Outbreak1

Elena Charpentier, Cécile Garnaud, Claire Wintenberger, Sébastien Bailly, Jean-Benjamin Murat2, John Rendu, Patricia Pavese, Thibault Drouet, Caroline Augier, Paolo Malvezzi, Anne Thiébaut-Bertrand, Marie-Reine Mallaret, Olivier Epaulard, Muriel Cornet, Sylvie Larrat, and Danièle MaubonComments to Author 
Author affiliations: Centre Hospitalier Universitaire Grenoble Alpes, Grenoble, France (E. Charpentier, C. Garnaud, C. Wintenberger, J.-B. Murat, J. Rendu, P. Pavese, T. Drouet, C. Augier, P. Malvezzi, A. Thiébaut-Bertrand, M.-R. Mallaret, O. Epaulard, M. Cornet, S. Larrat, D. Maubon); Université Grenoble Alpes, Grenoble (E. Charpentier, C. Garnaud, M.-R. Mallaret, O. Epaulard, M. Cornet, S. Larrat, D. Maubon); Institut National de la Santé et de la Recherche Médicale Université Paris Diderot, Paris, France (S. Bailly).

Main Article

Figure 2

Heatmaps representing distribution for mtLSU, CYTB, and SOD variants among patients infected during a Pneumocystis jirovecii pneumonia outbreak at a university hospital in France, 2009–2015. Patients shown in red correspond to cluster patients sharing the common C2a genotype. Patient shown in blue is the patient having the C2a genotype as minor variant (2%). Percentages shown indicate the level of mixed strain infections for each locus.

Figure 2. Heatmaps representing distribution for mtLSU, CYTB, and SOD variants among patients infected during a Pneumocystis jirovecii pneumonia outbreak at a university hospital in France, 2014–2015. Patients shown in red correspond to cluster patients sharing the common C2a genotype. Patient shown in blue is the patient having the C2a genotype as minor variant (2%). Percentages shown indicate the level of mixed-strain infections for each locus.

Main Article

1Preliminary results from this study were presented at the American Society for Microbiology Microbe 2016 Conference, June 16–20, 2016, Boston, Massachusetts, USA.

2Current affiliation: Centre Hospitalier Universitaire Limoges, Limoges, France.

Page created: July 17, 2017
Page updated: July 17, 2017
Page reviewed: July 17, 2017
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