Skip directly to site content Skip directly to page options Skip directly to A-Z link Skip directly to A-Z link Skip directly to A-Z link
Volume 24, Number 5—May 2018
Dispatch

Equine Encephalosis Virus in India, 2008

Pragya D. Yadav, César G. Albariño, Dimpal A. Nyayanit, Lisa Guerrero, M. Harley Jenks, Prasad Sarkale, Stuart T. Nichol, and Devendra T. MouryaComments to Author 
Author affiliations: National Institute of Virology, Pune, India (P.D. Yadav, D.A. Nyayanit, P. Sarkale, D.T. Mourya); Centers for Disease Control and Prevention, Atlanta, Georgia, USA (C.G. Albariño, L. Guerrero, M.H. Jenks, S.T. Nichol)

Main Article

Table 2

Nucleotide and amino acid divergence of different EEV strains from the EEV isolated from a horse in India, 2008*

EEV GenBank sequence
Nucleotide and amino acid divergence, %
NS1, 1,728 nt

NS2, 1,183 nt

NS3, 769 nt

VP1, 3,948 nt

VP2, 3,158 nt

VP3, 2,758 nt

VP4, 1,958 nt

VP5, 1,584 nt

VP6, 1,062 nt

VP7, 1,165 nt
ND
AD

ND
AD

ND
AD

ND
AD

ND
AD

ND
AD

ND
AD

ND
AD

ND
AD

ND
AD
EEV lungs NIV India 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AB811632.1 EEV Kimron1 7 1 6 15 26 17 2 1 46 50 3 0 4 11 27 14 4 7 4 0
FJ183388.1 EEV HS103/06 5 2 1 5 25 16 6 1 12 8 4 1 1 3 9 2 5 8 3 0
HQ630889.1 EEV strain 6 7 2 4 12 1 2 1 0 47 55 7 1 4 10 28 17 4 6 7 0
HQ630899.1 EEV strain 4 5 2 3 7 26 15 4 1 11 8 5 0 3 8 8 1 5 9 4 0
HQ630909.1 EEV strain 1 4 2 3 10 25 15 5 1 43 47 2 0 4 11 26 12 5 7 4 0
HQ630919.1 EEV strain 2 4 1 3 9 4 4 8 2 43 48 3 0 13 32 24 11 3 5 6 0
HQ630929.1 EEV strain 3 4 2 7 19 25 15 5 1 46 50 5 0 2 6 27 15 5 8 2 0
HQ630939.1 EEV strain 5 4 2 3 7 9 7 5 1 49 57 2 0 3 8 27 16 7 10 3 0
HQ630949.1 EEV strain 7 5 2 5 13 9 7 6 1 50 59 4 0 2 4 28 17 1 2 3 0

*AD, amino acid divergence; EEV, equine encephalosis virus; ND, nucleotide divergence; NIV, National Institute of Virology, Pune, India; NS, nonstructural protein; VP, virus capsid protein.

Main Article

Page created: April 17, 2018
Page updated: April 17, 2018
Page reviewed: April 17, 2018
The conclusions, findings, and opinions expressed by authors contributing to this journal do not necessarily reflect the official position of the U.S. Department of Health and Human Services, the Public Health Service, the Centers for Disease Control and Prevention, or the authors' affiliated institutions. Use of trade names is for identification only and does not imply endorsement by any of the groups named above.
file_external