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Volume 27, Number 12—December 2021
Research

Mammarenaviruses of Rodents, South Africa and Zimbabwe

Antoinette A. Grobbelaar, Jocelyn Jardine1, Felicity J. Burt2, Alasdair J. Shepherd, Susan P. Shepherd, Patricia A. Leman, Alan Kemp, Lawrence E.O. Braack3, Jacqueline WeyerComments to Author , Janusz T. Paweska, and Robert Swanepoel3
Author affiliations: National Institute for Communicable Diseases, Johannesburg, South Africa (A.A. Grobbelaar, J. Jardine, F.J. Burt, A.J. Shepherd, S.P. Shepherd, P.A. Leman, A. Kemp, J. Weyer, J.T. Paweska, R. Swanepoel); South African National Parks Board, Skukuza, South Africa (L.E.O. Braack).

Main Article

Figure 5

Phylogenetic relationships of 48 arenavirus isolates based on neighbor-joining analysis applying a Jukes-Cantor model of partial nucleoprotein sequences (≈912 nt), together with known host relationships and collection dates. Values at nodes indicate the level (%) of bootstrap support from 1,000 replicates. Scale bar indicates base substitutions per site. Bold indicates sequences determined in this study. ANGL, Angola; AR, Argentina; AU, Australia; CAM, Cameroon; CAR, Central Africa Republic; CO, Colombia; CIV, Côte d'Ivoire; ETH, Ethiopia; GHA, Ghana; MOZ, Mozambique; NAMB, Namibia; NIG, Nigeria; RSA, Republic of South Africa; SL, Sierra Leone; TAN, Tanzania; TR, Trinidad; USA, United States; ZAM, Zambia; ZIM, Zimbabwe.

Figure 5. Phylogenetic relationships of 48 arenavirus isolates based on neighbor-joining analysis applying a Jukes-Cantor model of partial nucleoprotein sequences (≈912 nt), together with known host relationships and collection dates. Values at nodes indicate the level (%) of bootstrap support from 1,000 replicates. Scale bar indicates base substitutions per site. Bold indicates sequences determined in this study. ANGL, Angola; AR, Argentina; AU, Australia; CAM, Cameroon; CAR, Central Africa Republic; CO, Colombia; CIV, Côte d'Ivoire; ETH, Ethiopia; GHA, Ghana; MOZ, Mozambique; NAMB, Namibia; NIG, Nigeria; RSA, Republic of South Africa; SL, Sierra Leone; TAN, Tanzania; TR, Trinidad; USA, United States; ZAM, Zambia; ZIM, Zimbabwe.

Main Article

1Current affiliation: EduVos, Midrand, South Africa.

2Current affiliation: University of the Free State, Bloemfontein, South Africa.

3Current affiliation: University of Pretoria, Pretoria, South Africa.

Page created: October 11, 2021
Page updated: November 19, 2021
Page reviewed: November 19, 2021
The conclusions, findings, and opinions expressed by authors contributing to this journal do not necessarily reflect the official position of the U.S. Department of Health and Human Services, the Public Health Service, the Centers for Disease Control and Prevention, or the authors' affiliated institutions. Use of trade names is for identification only and does not imply endorsement by any of the groups named above.
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