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Volume 32, Number 5—May 2026
Synopsis
Three Fatal Gestational Psittacosis Cases Caused by Chlamydia psittaci Strains Belonging to Closely Related Lineages, Japan
Table 1
Primers and probes used for diagnosing Chlamydia psittaci and MLST in study of 3 fatal gestational psittacosis cases caused by C. psittaci strains belonging to closely related MLST lineages, Japan, 2017–2024*
| Method | Target gene | Primer or probe | Sequence, 5′→3′ | Amplicon size, bp | Reference |
|---|---|---|---|---|---|
| Real-time PCR |
16S–23S rRNA operon |
CPSI_F | AAGGAGAGAGGCGCCCAA | 133 |
(21) |
| CPSI_R |
CAACCTAGTCAAACCGTCCTAA |
||||
| C. psittaci PCR | 16S rRNA | C.p.16S 45F | TGGATGAGGCATGCAAGTCG | 276 | This study |
| C.p.16S 320R | TGGCGGTCAATCTCTCAATC | ||||
| C.p.16S 1172F | GGGTTAACCAGGAGGAAGGC | 199 |
This study |
||
| C.p.16S 1370R |
AGCTGACACGCCATTACTAGC |
||||
| MLST PCR |
enoA | YPenoA3 | CCTATGATGAATCTCATTAATGG | 428 | (22); this study† |
| YPenoA4 | CCCAACCATCAAAATCTTCTTCCG | ||||
| fumC | YPfumC1 | GGGCTCCTGAGGTTATGCC | 649 | ||
| YPfumC2 | CGCAAATAATGAATCACCTTATC | ||||
| gatA | YPgatA3 | GCCTTAGAGTTAAGAAATGCCG | 509 | ||
| YPgatA4 | CCCCCTGTATCGGAACCTAACGC | ||||
| gidA | YPgidA1 | GCTTATTAGAGAGCTGTCCTGGC | 693 | ||
| YPgidA2 | CGCGTTTTCTAACCCACGG | ||||
| hemN | YPhemN1 | GGATCCATTTCGGAGGAGGC | 398 | ||
| hemN-R2† | TAAGCGGTCAGGCCGCATGTG | ||||
| hemN-F2† | GTCAAAGTCATGAAGAGTCAC | 505 | |||
| YPhemN2 | CCTGAAAGGATTTTCTCATGG | ||||
| hflX | YPhflX3 | GAGATTTTTGCTAATCGAGCG | 530 | ||
| YPhflX4 | GTAAAACATCTTCATGTAACGC | ||||
| oppA |
YPoppA3 | ATGCGCAAGATATCAATGGG | 500–610 |
||
| YPoppA4 |
GGCAAGGTTTGGTGTAACTCGC |
||||
| PCR | ompA | CPsittGenoFor | GCTACGGGTTCCGCTCT | FO-01: 625; YO-02: 631; NO-03: 622 | (23); this study† |
| Cp ompA R3 † | CAATYTTAGGATTAGATTGAGC | ||||
| Cp ompA F3 † | TGGGATCGCTYCGAYATTTTC | FO-01: 495; YO-02: 508; NO-03: 498 | |||
| Cp ompA R4 † | TGCTCTTGACCAGTTTACGCC | ||||
| Cp ompA F4 † | TATGGGAATGTGGTTGTGCAA | FO-01: 452; YO-02: 452; NO-03: 451 | |||
| CPsittGenoRev | TTTGTTGATYTGAATCGAAGC |
*MLST, multilocus sequence typing.
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1Current affiliation: Fukuoka University, Fukuoka, Japan.
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Page reviewed: April 16, 2026
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