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Volume 10, Number 9—September 2004

Research

Genotyping, Orientalis-like Yersinia pestis, and Plague Pandemics

Michel Drancourt*, Véronique Roux*, La Vu Dang*, Lam Tran-Hung*, Dominique Castex†, Viviane Chenal-Francisque‡, Hiroyuki Ogata§, Pierre-Edouard Fournier*, Eric Crubézy¶, and Didier Raoult*Comments to Author 
Author affiliations: *Université de la Méditerranée, Marseille, France; †Université de Bordeaux 1, Talence, France; ‡Institut Pasteur, Paris, France; §Information Génomique et Structurale, Marseille, France; ¶Université Paul Sabatier, Toulouse, France

Main Article

Table 1

Alleles of eight spacers in three Yersinia pestis biovars

Biovar YP no. strains Country YP1 YP3 YP4 YP5 YP7 YP8 YP9 YP10 Isolate type
Antiqua
611/Japan Japan 1 4 1 3 1 1 1 1 1
552/Margaret Kenya 1 3 1 1 4 1 1 1 2
548/343 Belgium 1 3 1 1 5 1 1 1 3
544 Congo 1 3 1 1 7 1 1 1 4
549 Kenya 1 3 1 1 8 1 1 1 5
542 Belgium 1 3 1 1 6 1 1 1 6
550 Congo 1 3 1 1 9 1 1 1 7
553 Kenya 1 3 1 1 7 1 1 1 4
566 Kenya 1 3 1 1 6 1 1 1 6
677 Kenya 1 3 1 1 9 1 1 1 7
545 Kenya 1 3 1 1 7 1 1 1 4
Medievalis
519/PKH-4 Kurdistan 2 2 2 2 1 1 1 1 10
616/PAR-13 Iran 2 2 2 2 1 1 1 1 8
557/PKR292 Kurdistan 2 2 2 2 4 1 1 1 9
564 Kurdistan 2 2 2 2 6 1 1 1 10
565 Turkey 2 2 2 2 5 1 1 1 8
557 Kurdistan 2 2 2 2 4 1 1 1 9
518 Kurdistan 2 2 2 2 5 1 1 1 8
520 Kurdistan 2 2 2 2 5 1 1 1 8
560 Kurdistan 2 2 2 2 5 1 1 1 8
561 Kurdistan 2 2 2 2 5 1 1 1 8
617 Iran 2 2 2 2 5 1 1 1 8
670 Kurdistan 2 2 2 2 5 1 1 1 8
1594 Kurdistan 2 2 2 2 9 1 1 1 11
Orientalis
304/6-69 Madagascar 1 5 1 1 1 2 2 1 12
685 Germany 1 5 1 1 2 2 2 1 13
Hamburg10 USA 1 5 1 1 2 2 2 2 14
CO92 USA 1 5 1 1 2 2 2 1 13
507 Vietnam 1 1 1 1 6 2 2 1 15
1513 Madagascar 1 5 1 1 2 2 2 1 16
571 Brazil 1 5 1 1 4 2 2 1 17
613 Myanmar 1 5 1 1 3 2 2 1 18
643 Madagascar 1 5 1 1 3 2 2 1 18
695 Germany 1 1 1 1 4 2 2 1 17
772 Vietnam 1 5 1 1 4 2 2 1 17
989 Vietnam 1 5 1 1 1 2 2 1 19

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