Volume 11, Number 8—August 2005
Research
Coxiella burnetii Genotyping
Olga Glazunova*1, Véronique Roux*1, Olga Freylikman*†, Zuzana Sekeyova*‡, Ghislain Fournous*, Judith Tyczka§, Nikolai Tokarevich†, Elena Kovacova‡, Thomas J. Marrie¶, and Didier Raoult*
Table 2
Alleles of 10 spacers which allow the definition of the different Coxiella burnetii sequence types
| COX |
2 | 5 | 18 | 20 | 22 | 37 | 51 | 56 | 57 | 61 |
|---|---|---|---|---|---|---|---|---|---|---|
| ST | ||||||||||
| 1 | 5 | 6 | 3 | 4 | 6 | 5 | 8 | 1 | 5 | 6 |
| 2 | 5 | 6 | 3 | 5 | 6 | 5 | 8 | 1 | 5 | 6 |
| 3 | 5 | 6 | 3 | 4 | 6 | 7 | 8 | 1 | 5 | 6 |
| 4 | 5 | 6 | 3 | 2 | 6 | 5 | 8 | 1 | 5 | 6 |
| 5 | 4 | 6 | 3 | 5 | 6 | 2 | 8 | 2 | 5 | 6 |
| 6 | 4 | 3 | 3 | 5 | 6 | 5 | 8 | 2 | 5 | 6 |
| 7 | 4 | 6 | 3 | 5 | 6 | 5 | 8 | 2 | 5 | 6 |
| 8 | 5 | 4 | 2 | 5 | 1 | 5 | 3 | 3 | 4 | 4 |
| 9 | 1 | 4 | 2 | 5 | 1 | 5 | 2 | 3 | 4 | 6 |
| 10 | 5 | 4 | 2 | 5 | 1 | 5 | 2 | 3 | 2 | 6 |
| 11 | 6 | 5 | 1 | 6 | 5 | 4 | 5 | 4 | 3 | 2 |
| 12 | 3 | 5 | 1 | 6 | 5 | 4 | 5 | 4 | 3 | 2 |
| 13 | 3 | 5 | 1 | 6 | 5 | 4 | 5 | 5 | 3 | 2 |
| 14 | 7 | 5 | 1 | 6 | 5 | 6 | 9 | 4 | 3 | 2 |
| 15 | 7 | 5 | 1 | 6 | 5 | 6 | 9 | 6 | 3 | 2 |
| 16 | 3 | 7 | 5 | 3 | 4 | 1 | 6 | 7 | 6 | 5 |
| 17 | 3 | 7 | 5 | 7 | 4 | 1 | 10 | 8 | 6 | 7 |
| 18 | 3 | 7 | 1 | 6 | 3 | 4 | 7 | 9 | 6 | 3 |
| 19 | 3 | 2 | 7 | 8 | 5 | 4 | 11 | 9 | 6 | 5 |
| 20 | 3 | 2 | 6 | 1 | 5 | 4 | 4 | 10 | 6 | 5 |
| 21 | 2 | 1 | 4 | 6 | 2 | 3 | 1 | 11 | 1 | 1 |
| 22 | 3 | 7 | 1 | 6 | 3 | 8 | 7 | 9 | 6 | 8 |
| 23 | 3 | 7 | 1 | 6 | 3 | 8 | 7 | 9 | 6 | 3 |
| 24 | 3 | 5 | 1 | 6 | 5 | 4 | 5 | 12 | 3 | 9 |
| 25 | 3 | 7 | 1 | 6 | 3 | 4 | 7 | 9 | 7 | 3 |
| 26 | 9 | 4 | 8 | 5 | 8 | 5 | 2 | 3 | 4 | 6 |
| 27 | 3 | 5 | 1 | 6 | 5 | 4 | 5 | 12 | 3 | 2 |
| 28 | 8 | 4 | 8 | 5 | 7 | 5 | 2 | 3 | 4 | 6 |
| 29 | 3 | 7 | 1 | 9 | 3 | 4 | 7 | 9 | 6 | 3 |
| 30 | 5 | 6 | 9 | 5 | 6 | 5 | 8 | 13 | 8 | 6 |
1Dr. Glazunova and Dr. Roux contributed equally to this work.
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