Volume 23, Number 3—March 2017
Research
Whole-Genome Analysis of Bartonella ancashensis, a Novel Pathogen Causing Verruga Peruana, Rural Ancash Region, Peru
Table 1
Characteristic | Patient 20, 3-y-old boy, isolate no. |
Patient 41, 10-y-old boy, isolate no. |
||
---|---|---|---|---|
20.00 | 20.60 | 41.00 | 41.60 | |
Patient signs |
Lesions on hands and feet that disappeared after antimicrobial drug treatment |
Lesions on hands and feet that disappeared after antimicrobial drug treatment |
||
Antimicrobial drugs used | Azithromycin on days 0 and 7 | Rifampin daily on days 0–14 | ||
Whole blood collection time |
Day 0 |
Day 60 |
Day 0 |
Day 60 |
Peripheral blood smear† | Negative | Negative | Negative | Negative |
Blood culture for Bartonella sp. | Positive | Positive | Positive | Positive |
16S 321/533 TaqMan qPCR‡ | Negative | Negative | 3.93 × 105 (19.24) | 6.36 × 104 (22.15) |
16S 27F2/533R PCR | Negative | Negative | Positive | Positive |
B. ancashensis–specific PCR§ |
Negative |
Negative |
Positive |
Positive |
Blood culture gltA PCR/sequencing | B. ancashensis | B. ancashensis | B. bacilliformis | B. ancashensis |
Isolate by pure-culture sequencing | rrs, gltA, rpoB; whole genome | rrs, gltA, rpoB; whole genome | gltA | rrs, gltA, rpoB; whole genome |
*gltA, citrate synthase gene; rpoB, β subunit of RNA polymerase gene; rrs, 16S rRNA gene.
†Rapid microscopic diagnosis for Carrion’s disease (16).
‡Values are 16S rRNA gene copy number/microliter (quantitative cycle threshold).
§Primers 22RC-3F (5′-TTCGGCTTAGCTTATCCGTTTCACAA-3′) and 32RC-5R (5′-CGTAAGAGCTTTGTGGCAAAATAGCAA-3′) were used; the expected PCR amplicons size was 0.8 kb, which corresponds to nt 673839–674636 of B. ancashensis (GenBank accession no. CP010401).
1Current affiliation: University of Maryland, Baltimore, Maryland, USA.
2These authors contributed equally to this article.
Page created: February 17, 2017
Page updated: February 17, 2017
Page reviewed: February 17, 2017
The conclusions, findings, and opinions expressed by authors contributing to this journal do not necessarily reflect the official position of the U.S. Department of Health and Human Services, the Public Health Service, the Centers for Disease Control and Prevention, or the authors' affiliated institutions. Use of trade names is for identification only and does not imply endorsement by any of the groups named above.