Table 4

Detection and Circulation of a Novel Rabbit Hemorrhagic Disease Virus in Australia

Jackie E. Mahar, Andrew J. Read, Xingnian Gu, Nadya Urakova¹, Roslyn Mourant, Melissa Piper, Stéphanie Haboury, Edward C. Holmes, Tanja Strive, and Robyn N. Hall

Author affiliations: Commonwealth Scientific and Industrial Research Organisation (CSIRO), Acton, Australian Capital Territory, Australia (J.E. Mahar, N. Urakova, R. Mourant, M. Piper, S. Haboury, T. Strive, R.N. Hall); The University of Sydney, Sydney, New South Wales, Australia (J.E. Mahar, E.C. Holmes); Elizabeth Macarthur Agricultural Institute, Menangle, New South Wales, Australia (A.J. Read, X. Gu); Invasive Animals Cooperative Research Centre, Bruce, Australian Capital Territory, Australia (N. Urakova, T. Strive, R.N. Hall)

Main Article

Outbreaks of RHDV in rabbits, Australia, January 2014–March 2015*

Outbreak no.	Isolate name	Collection date	Location, state	Variant	Rabbit origin	GenBank accession no.
1	AUS/NSW/BER-1/2013/12†	Dec 2013‡	Berowra, NSW	RHDV G2	Domestic	KY628307
1	AUS/NSW/BER-2/2013/12†	Dec 2013‡	Berowra, NSW	RHDVa	Domestic	KY628309
2	AUS/NSW/BER-3/2014/01†	Jan 2014	Berowra, NSW	RHDVa	Domestic	KY628310
2	AUS/NSW/BER-4/2014/01†	Jan 2014	Berowra, NSW	RHDVa	Domestic	KY628311
2	AUS/NSW/BER-5/2014/01	Jan 2014	Berowra, NSW	RHDVa	Domestic	NA
2	AUS/NSW/BER-6/2014/01	Jan 2014	Berowra, NSW	RHDVa	Domestic	NA
2	AUS/NSW/BER-7/2014/01	Jan 2014	Berowra, NSW	RHDVa	Domestic	NA
2	AUS/NSW/BER-8/2014/01†	Jan 2014	Berowra, NSW	RHDVa	Domestic	KY628312
2	AUS/NSW/BER-9/2014/01	Jan 2014	Berowra, NSW	RHDVa	Domestic	NA
2	AUS/NSW/BER-10/2014/01†	Jan 2014	Berowra, NSW	RHDVa	Domestic	KY628308
2	AUS/NSW/BER-11/2014/01	Jan 2014	Berowra, NSW	RHDVa	Domestic	NA
3	AUS/NSW/KYO-1/2014/01†	Jan 2014	Kyogle, NSW	RHDVa	Domestic	KY628316
3	AUS/NSW/KYO-2/2014/01	Jan 2014	Kyogle, NSW	RHDVa	Domestic	NA
4	AUS/NSW/BlueGums1/2014/03	Mar 2014	Murrumbateman, NSW	RHDV G2	Wild	KT006732.1
5	AUS/NSW/ANN-1/2014/04†	Apr 2014	Annangrove, NSW	RHDVa	Domestic	KY628306
6	AUS/NSW/OUR-1/2014/06†	June 2014	Ourimbah, NSW	RHDV G2	Wild	KY628318
6	AUS/NSW/OUR-2/2014/06†	June 2014	Ourimbah, NSW	RHDV G2	Wild	KY628319
7	AUS/NSW/GIR-1/2014/07†	July 2014	Girvan, NSW	RHDVa	Wild	KY628314
7	AUS/NSW/GIR-2/2014/07†	July 2014	Girvan, NSW	RHDVa	Wild	KY628315
8	AUS/NSW/BLA-1/2014/07†	July 2014	Blacktown, NSW	RHDVa	Domestic	KY628313
9	AUS/NSW/WAL-1/2015/01†	Jan 2015	Walcha, NSW	RHDVa	Domestic	KY628320
10	AUS/NSW/OAK-1/2015/02†	Feb 2015	The Oaks, NSW	RHDVa	Domestic	KY628317
11	AUS/ACT/MF-109/2015/03	Mar 2015	Mulligan’s Flat, ACT	RHDVa	Wild§	KY628321

*Samples are numbered according to the date on which they were collected. These numbers correspond to those used on the map in Figure 2. ACT, Australian Capital Territory; NSW, New South Wales; RHDV, rabbit hemorrhagic disease virus.
†Samples for which the full genome was sequenced in this study.
‡Detection of RHDVa confirmed in January 2014.
§Virus sequence obtained from a healthy shot rabbit.

Main Article

¹Current affiliation: University of Alabama at Birmingham School of Medicine, Birmingham, Alabama, USA.

Page created: January 09, 2018

Page updated: January 09, 2018

Page reviewed: January 09, 2018

The conclusions, findings, and opinions expressed by authors contributing to this journal do not necessarily reflect the official position of the U.S. Department of Health and Human Services, the Public Health Service, the Centers for Disease Control and Prevention, or the authors' affiliated institutions. Use of trade names is for identification only and does not imply endorsement by any of the groups named above.