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Volume 31, Number 3—March 2025
Research

High Prevalence of atpE Mutations in Bedaquiline-Resistant Mycobacterium tuberculosis Isolates, Russia

Danila ZimenkovComments to Author , Anastasia Ushtanit, Elizaveta Gordeeva, Elena Guselnikova, Yakov Schwartz, and Natalia Stavitskaya
Author affiliation: Author affiliations: Center for Precision Genome Editing and Genetic Technologies for Biomedicine, Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia (D. Zimenkov, A. Ushtanit); Federal State Budgetary Institution Novosibirsk TB Research Institute, Ministry of Health, Novosibirsk, Russia (E. Gordeeva, E. Guselnikova, Y. Schwartz, N. Stavitskaya)

Main Article

Table 1

Clinical characteristics of TB cases and resistance to bedaquiline and linezolid determined by phenotypic and genotypic methods in study of high prevalence of atpE mutations in bedaquiline-resistant Mycobacterium tuberculosis isolates, Russia*

Category Isolate identification
#1 #2 #3 #4 #5 #6 #7 #8 #9c
Year of TB diagnosis 2017 2006 2015 2010 2018 2017 2017 2012 2007
HIV status Yes No No No Yes No No Yes No
Source of the culture Sputum Surgery Sputum Wound exudate Sputum Sputum Wound exudate Sputum Sputum
No. days from treatment start 92 718 196 1,045 206 558 866 609 1,154
Treatment outcome Treatment failed Not evaluated Treatment failed Death from TB Death from TB Treatment failed Treatment failed Treatment failed Treatment failed
Sublineage B0 B0 B0 CA/R B0 B0 B0 B0 B0
Bedaquiline phenotype R R R S R R R R R
AtpE Glu61DAsp, g>t 100%
AtpE Glu61Asp, g>c 59%
AtpE Ile66Met 100% 100%
MmpR5 Cys46fs 21%
MmpR5 Asp47fs 52%
MmpR5 Glu49fs 42% 97%
MmpR5 Ser63Gly 75%
MmpR5 Ile67fs 97% 96%
MmpR5 Gln76stop 28%
MmpR5 Leu143_Glu147dup 22%
MmpL4 Leu130fs† 91%
MmpL5 Asn772Thr† 37%
AtpB Val165Leu† 100%
Linezolid phenotype S S S R S S S R R
RplC Cys154Arg 100% 100% 100%

*Percentages indicate relative number of reads with mutations. ID, identification; R, resistant; S, susceptible; TB, tuberculosis. †Mutations in candidate genes associated with resistance to bedaquiline.

Main Article

Page created: January 06, 2025
Page updated: February 21, 2025
Page reviewed: February 21, 2025
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