Strongyloides Genetic Diversity among Humans, Dogs, and Nonhuman Primates, Central African Republic, 2016–2022
Eva Nosková, Vladislav Ilík, Frédéric Stéphane Singa Niatou, Laurent Dumas, Terence Fuh, Jean-Francais Dicky, Terézia Kurucová, Vojtech Baláž, Klára Judita Petrželková, and Barbora Pafčo
Author affiliation: Masaryk University, Brno, Czech Republic (E. Nosková, V. Ilík, B. Pafčo); Masaryk University, Central European Institute of Technology, Brno (T. Kurucová); Czech Academy of Sciences, Institute of Vertebrate Biology, Brno (E. Nosková, V. Ilík, K.J. Petrželková, B. Pafčo); Czech Academy of Sciences, Biology Center, Institute of Parasitology, Ceske Budejovice, Czech Republic (K.J. Petrželková); WWF Central African Republic Programme Office, Dzanga Sangha Protected Areas, Bangui, Central African Republic (F.S. Singa Niatou, T. Fuh); Toulouse National School of Veterinarians, Toulouse, France (L. Dumas); University of Veterinary Sciences, Brno (V. Baláž)
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Figure 4

Figure 4. Bayesian phylogenetic tree based on Strongyloides spp. cox1 (700 bp) sequences derived from study of Strongyloides genetic diversity among humans, dogs, and nonhuman primates, Dzanga-Sangha Protected Areas, Central African Republic, 2016–2022. Tree also includes sequences downloaded from GenBank; accession numbers are provided. The alignment was performed in Geneious (https://www.geneious.com) using the general time-reversible model of nucleotide substitution with gamma distribution. Branch lengths indicate expected substitutions per site. Necator americanus (accession no. AJ417719.2) was included as an outgroup. Node support was estimated from 106 iterations. Color silhouettes indicate host species: light green, human; olive green, dog; blue, gorilla; red, chimpanzee; violet, mangabey. Colored boxes indicate species/lineage type. ASV, amplicon sequencing variant; CAR, Central African Republic.
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