Plasmodium falciparum K76T pfcrt Gene Mutations and Parasite Population Structure, Haiti, 2006–2009
Macarthur Charles, Sanchita Das, Rachel Daniels, Laura Kirkman, Glavdia G. Delva, Rodney Destine, Ananias A. Escalante, Leopoldo Villegas, Noah M. Daniels, Kristi Shigyo, Sarah K. Volkman, Jean W. Pape, and Linnie M. Golightly
Author affiliations: Weill Medical College of Cornell University, New York, New York, USA (M. Charles, S. Das, L. Kirkman, K. Shigyo, J.W. Pape, L.M. Golightly); The Haitian Group for the Study of Kaposi's Sarcoma and Opportunistic Infections Centers (GHESKIO); Port-au-Prince, Haiti (M. Charles, G.G. Delva, R. Destine, J.W. Pape); Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA (R. Daniels, S.K. Volkman); Broad Institute, Cambridge, Massachusetts, USA (R. Daniels, S.K. Volkman); Temple University, Department of Biology, Philadelphia, Pennsylvania, USA (A. Escalante); ICF International, Rockville, Maryland, USA (L. Villegas); Centro de Investigación de Campo Dr. Francesco Vitanza, Tumeremo, Venezuela (L. Villegas); Massachusetts Institute of Technology, Cambridge (N.M. Daniels); Simmons College, Boston (S.K. Volkman)
Main Article
Table 3
Polygenomic barcodes of Plasmodium falciparum samples determined to assess genetic relatedness, Haiti, 2006–2007
Sample |
Location |
Year |
Molecular barcode* |
1 |
Cap-Haitien |
2006 |
TACTGCGGATTNNCCCNAAGCTTG |
2 |
Deschappelles |
2006 |
TATCCCGGATCANACCCTANCNTG |
3 |
Deschappelles |
2007 |
TATCCCNGATCATACCCTAACCTG |
4 |
Deschappelles |
2007 |
TACTNCNGATTNNNCNCAANCNTG |
5 |
Jeremie |
2007 |
TACTNCNGATCGTNACNTANNTTG |
6 |
Les Cayes |
2006 |
CACXGXGXATCXTAAXCTAGNCTG |
7 |
Les Cayes |
2007 |
TATXCXGGATNXCCCCCACGCNTG |
8
|
Les Cayes
|
2007
|
TACTCCGGATCGTCCANAAGCTTG
|
*X indicates missing data, where neither the major or minor allele could be detected; N indicates both alleles detected. |
Main Article
Page created: April 13, 2016
Page updated: April 13, 2016
Page reviewed: April 13, 2016
The conclusions, findings, and opinions expressed by authors contributing to this journal do not necessarily reflect the official position of the U.S. Department of Health and Human Services, the Public Health Service, the Centers for Disease Control and Prevention, or the authors' affiliated institutions. Use of trade names is for identification only and does not imply endorsement by any of the groups named above.